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contig_metadata

29 rows where bioproject = "PRJNA356682", tax_phylum = "Chloroflexota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 29 ✖

tax_phylum 1

  • Chloroflexota · 29 ✖

tax_kingdom 1

bioproject 1

  • PRJNA356682 · 29 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10601192 10601192 PRJNA356682_P_NODE_22869_length_304_cov_3.653680_g22178_i0 PRJNA356682 22869 304 3.65368 11.1071872 Anaerolineaceae bacterium oral taxon 439 1889813 Bacteria Bacteria 364 3.1999999999999993e-96   NTclustered gi|1061024832|gb|CP017039.1| 1889813 g22178 i0 88.926 222.342105263158 298 30 98 3 1 298 2682322 2682028 Anaerolineaceae bacterium oral taxon 439 strain W11661 chromosome, complete genome blastn 67592 364 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium oral taxon 439
11876468 11876468 PRJNA356682_P_NODE_40150_length_246_cov_0.890173_g39459_i0 PRJNA356682 40150 246 0.890173 2.18982558 Anaerolineales bacterium 2073117 Bacteria Bacteria 151 5.76e-42   NR HMD80414.1 2073117 g39459 i0 92.7 2 82 6 100 0 246 1 239 320 HMD80414.1 dihydropteroate synthase [Anaerolineales bacterium] diamond 492 151 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
14426388 14426388 PRJNA356682_P_NODE_30072_length_271_cov_1.555556_g29381_i0 PRJNA356682 30072 271 1.555556 4.21555676 Anaerolineaceae bacterium oral taxon 439 1889813 Bacteria Bacteria 327 3.69e-85   NTclustered gi|1061024832|gb|CP017039.1| 1889813 g29381 i0 88.561 209.90405904059 271 30 99 1 2 271 2682326 2682596 Anaerolineaceae bacterium oral taxon 439 strain W11661 chromosome, complete genome blastn 56884 327 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium oral taxon 439
15700398 15700398 PRJNA356682_P_NODE_36353_length_251_cov_0.865169_g35662_i0 PRJNA356682 36353 251 0.865169 2.17157419 Tepidiforma flava 3004094 Bacteria Bacteria 300 7.36e-77   NTclustered gi|2421951025|gb|CP115149.1| 3004094 g35662 i0 91.324 6.25498007968127 219 19 87 0 28 246 788341 788123 Tepidiforma flava strain YIM 72310 chromosome, complete genome blastn 1570 300 1 Bacteria   Bacillati Chloroflexota Tepidiformia Tepidiformales Tepidiformaceae Tepidiforma Tepidiforma flava
16975155 16975155 PRJNA356682_P_NODE_37494_length_249_cov_1.312500_g36803_i0 PRJNA356682 37494 249 1.3125 3.268125 Chloroflexota bacterium 2026724 Bacteria Bacteria 96.7 4.14e-22   NR MEA2633015.1 2026724 g36803 i0 63.8 0.963855421686747 80 29 96.4 0 248 9 40 119 MEA2633015.1 hypothetical protein [Chloroflexota bacterium] diamond 240 96.7 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
18249477 18249477 PRJNA356682_P_NODE_41275_length_245_cov_0.895349_g40584_i0 PRJNA356682 41275 245 0.895349 2.19360505 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 158 6.02e-44   NR HEU5203623.1 2952938 g40584 i0 92.6 3.96734693877551 81 6 99.2 0 1 243 284 364 HEU5203623.1 molybdopterin-dependent oxidoreductase [Candidatus Limnocylindrales bacterium] diamond 972 158 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
24623648 24623648 PRJNA356682_P_NODE_24180_length_297_cov_2.062500_g23489_i0 PRJNA356682 24180 297 2.0625 6.125625 Ktedonobacteria bacterium brp13 2717365 Bacteria Bacteria 243 1.53e-59   NTclustered gi|1915456248|dbj|AP024096.1| 2717365 g23489 i0 85.957 667.535353535354 235 24 78 8 39 270 792907 792679 Ktedonobacteria bacterium brp13 DNA, complete genome blastn 198258 243 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria       Ktedonobacteria bacterium brp13
26711870 26711870 PRJNA356682_P_NODE_42201_length_244_cov_0.900585_g41510_i0 PRJNA356682 42201 244 0.900585 2.1974274 root 1 Root_unresolved Root_unresolved 58.9 2.15e-8   NR RLC86712.1 2026724 g41510 i0 51.9 2.4344262295082 52 25 63.9 0 215 60 12 63 RLC86712.1 MAG: hypothetical protein DRJ03_08035 [Chloroflexota bacterium] diamond 594 59.3 0.993254637436762 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
26933762 26933762 PRJNA356682_P_NODE_31062_length_267_cov_1.587629_g30371_i0 PRJNA356682 31062 267 1.587629 4.23896943 Bacillati 1783272 Bacteria Bacteria 106 1.0099999999999999e-24   NR MCE7988446.1 2293554 g30371 i0 59.6 12.8651685393258 89 36 100 0 267 1 58 146 MCE7988446.1 FAD-binding protein [Caldilinea sp. CFX5] diamond 3435 106 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae Caldilinea Caldilinea sp. CFX5
27296106 27296106 PRJNA356682_P_NODE_42283_length_244_cov_0.900585_g41592_i0 PRJNA356682 42283 244 0.900585 2.1974274 Chloroflexota bacterium 2026724 Bacteria Bacteria 128 4.47e-36   NR HEX2326128.1 2026724 g41592 i0 90.2 0.75 61 6 75 0 3 185 69 129 HEX2326128.1 DOPA 4,5-dioxygenase family protein [Chloroflexota bacterium] diamond 183 128 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27391094 27391094 PRJNA356682_P_NODE_19223_length_328_cov_1.854902_g18532_i0 PRJNA356682 19223 328 1.854902 6.08407856 Anaerolineae bacterium 2052143 Bacteria Bacteria 43.5 0.0471   NR MBN1138729.1 2052143 g18532 i0 39.1 0.585365853658537 64 38 58.5 1 14 205 47 109 MBN1138729.1 hypothetical protein [Anaerolineae bacterium] diamond 192 43.5 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
27801508 27801508 PRJNA356682_P_NODE_39404_length_247_cov_0.885057_g38713_i0 PRJNA356682 39404 247 0.885057 2.18609079 Roseiflexaceae bacterium 2762507 Bacteria Bacteria 85.5 3.06e-18   NR HEY3228417.1 2762507 g38713 i0 68.8 1.55465587044534 64 20 77.7 0 247 56 161 224 HEY3228417.1 sigma-70 family RNA polymerase sigma factor [Roseiflexaceae bacterium] diamond 384 85.5 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Roseiflexaceae   Roseiflexaceae bacterium
28134411 28134411 PRJNA356682_P_NODE_44605_length_241_cov_0.916667_g43914_i0 PRJNA356682 44605 241 0.916667 2.20916747 Bacteria 2 Bacteria Bacteria 108 3.8200000000000005e-27   NR MEW5992307.1 2026724 g43914 i0 65.4 7.00829875518672 81 27 99.6 1 240 1 7 87 MEW5992307.1 hypothetical protein [Chloroflexota bacterium] diamond 1689 109 0.990825688073395 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28243231 28243231 PRJNA356682_P_NODE_17466_length_342_cov_1.360595_g16775_i0 PRJNA356682 17466 342 1.360595 4.6532349 Anaerolineaceae bacterium 2024896 Bacteria Bacteria 44.7 0.0201   NR MBP9675947.1 2024896 g16775 i0 35.1 0.649122807017544 74 43 64.9 1 119 340 186 254 MBP9675947.1 phosphatidate cytidylyltransferase [Anaerolineaceae bacterium] diamond 222 44.7 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
28323556 28323556 PRJNA356682_P_NODE_37146_length_250_cov_0.870056_g36455_i0 PRJNA356682 37146 250 0.870056 2.17514 Bacteria 2 Bacteria Bacteria 61.2 1.81e-9   NR NJN44300.1 2052143 g36455 i0 49.2 1.476 61 29 73.2 1 187 5 9 67 NJN44300.1 SET domain-containing protein [Anaerolineae bacterium] diamond 369 61.6 0.993506493506494 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
28843158 28843158 PRJNA356682_P_NODE_44128_length_242_cov_0.905325_g43437_i0 PRJNA356682 44128 242 0.905325 2.1908865 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 64.3 4.73e-11   NR HEY8168823.1 2952938 g43437 i0 71.4 0.433884297520661 35 10 43.4 0 241 137 80 114 HEY8168823.1 crosslink repair DNA glycosylase YcaQ family protein [Candidatus Limnocylindrales bacterium] diamond 105 64.3 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
29127711 29127711 PRJNA356682_P_NODE_36209_length_251_cov_0.865169_g35518_i0 PRJNA356682 36209 251 0.865169 2.17157419 Chloroflexota bacterium 2026724 Bacteria Bacteria 114 5.5e-29   NR MEP7291541.1 2026724 g35518 i0 70 0.956175298804781 80 24 95.6 0 240 1 48 127 MEP7291541.1 c-type cytochrome [Chloroflexota bacterium] diamond 240 114 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29506297 29506297 PRJNA356682_P_NODE_36070_length_251_cov_0.865169_g35379_i0 PRJNA356682 36070 251 0.865169 2.17157419 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 148 3.35e-41   NR MEO6349621.1 2952938 g35379 i0 81.9 1.9840637450199201 83 15 99.2 0 3 251 40 122 MEO6349621.1 hypothetical protein [Candidatus Limnocylindrales bacterium] diamond 498 148 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
29695466 29695466 PRJNA356682_P_NODE_44070_length_242_cov_0.911243_g43379_i0 PRJNA356682 44070 242 0.911243 2.20520806 Candidatus Villigracilis vicinus 3140679 Bacteria Bacteria 149 3.02e-40   NR MBK9779665.1 3140679 g43379 i0 92.5 0.991735537190083 80 6 99.2 0 2 241 389 468 MBK9779665.1 sugar phosphorylase [Candidatus Villigracilis vicinus] diamond 240 149 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Candidatus Villigracilaceae Candidatus Villigracilis Candidatus Villigracilis vicinus
30011810 30011810 PRJNA356682_P_NODE_37231_length_250_cov_0.870056_g36540_i0 PRJNA356682 37231 250 0.870056 2.17514 Chloroflexota bacterium 2026724 Bacteria Bacteria 50.1 1.46e-5   NR MDP8924166.1 2026724 g36540 i0 75.9 0.348 29 7 34.8 0 1 87 70 98 MDP8924166.1 hypothetical protein [Chloroflexota bacterium] diamond 87 50.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30011814 30011814 PRJNA356682_P_NODE_44151_length_242_cov_0.875740_g43460_i0 PRJNA356682 44151 242 0.87574 2.1192908 Chloroflexota bacterium 2026724 Bacteria Bacteria 168 2.72e-50   NR HLH23715.1 2026724 g43460 i0 98.8 0.991735537190083 80 1 99.2 0 3 242 4 83 HLH23715.1 Phenylacetic acid catabolic protein [Chloroflexota bacterium] diamond 240 168 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30137650 30137650 PRJNA356682_P_NODE_22452_length_307_cov_1.316239_g21761_i0 PRJNA356682 22452 307 1.316239 4.04085373 Caldilineaceae bacterium 2614250 Bacteria Bacteria 121 1.71e-32   NR MCC6457105.1 2614250 g21761 i0 74.4 0.762214983713355 78 20 76.2 0 73 306 1 78 MCC6457105.1 ferritin-like domain-containing protein [Caldilineaceae bacterium] diamond 234 121 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
31307121 31307121 PRJNA356682_P_NODE_40975_length_245_cov_0.895349_g40284_i0 PRJNA356682 40975 245 0.895349 2.19360505 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 119 1.31e-32   NR HET8785741.1 2952938 g40284 i0 77 1.77551020408163 74 17 90.6 0 243 22 52 125 HET8785741.1 GNAT family N-acetyltransferase [Candidatus Limnocylindrales bacterium] diamond 435 119 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
31528699 31528699 PRJNA356682_P_NODE_37596_length_249_cov_0.875000_g36905_i0 PRJNA356682 37596 249 0.875 2.17875 Chloroflexota bacterium 2026724 Bacteria Bacteria 63.2 2.31e-9   NR MFO7661676.1 2026724 g36905 i0 41.4 1.79518072289157 87 42 94 1 247 14 85 171 MFO7661676.1 glycosyltransferase family 4 protein [Chloroflexota bacterium] diamond 447 63.2 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31971389 31971389 PRJNA356682_P_NODE_44958_length_241_cov_0.916667_g44267_i0 PRJNA356682 44958 241 0.916667 2.20916747 Chloroflexota bacterium 2026724 Bacteria Bacteria 131 6.789999999999999e-34   NR MDQ3693132.1 2026724 g44267 i0 76.3 1.9792531120332 80 19 99.6 0 241 2 112 191 MDQ3693132.1 SagB family peptide dehydrogenase [Chloroflexota bacterium] diamond 477 131 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32097938 32097938 PRJNA356682_P_NODE_7418_length_515_cov_1.042986_g6730_i0 PRJNA356682 7418 515 1.042986 5.3713779 Roseiflexaceae bacterium 2762507 Bacteria Bacteria 69.7 2.67e-10   NR HMP41212.1 2762507 g6730 i0 35.3 2.56893203883495 139 68 76.9 4 495 100 241 364 HMP41212.1 hypothetical protein [Roseiflexaceae bacterium] diamond 1323 69.7 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Roseiflexaceae   Roseiflexaceae bacterium
32351306 32351306 PRJNA356682_P_NODE_38659_length_248_cov_0.880000_g37968_i0 PRJNA356682 38659 248 0.88 2.1824 Chloroflexota bacterium 2026724 Bacteria Bacteria 70.5 2.81e-12   NR HZU05790.1 2026724 g37968 i0 72.7 1.05241935483871 44 12 53.2 0 1 132 218 261 HZU05790.1 Fe-S cluster assembly ATPase SufC [Chloroflexota bacterium] diamond 261 70.5 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32477890 32477890 PRJNA356682_P_NODE_43679_length_242_cov_0.911243_g42988_i0 PRJNA356682 43679 242 0.911243 2.20520806 Roseiflexaceae bacterium 2762507 Bacteria Bacteria 144 1.42e-41   NR HJZ50197.1 2762507 g42988 i0 87.3 1.95867768595041 79 10 97.9 0 242 6 45 123 HJZ50197.1 aspartyl protease family protein [Roseiflexaceae bacterium] diamond 474 144 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Roseiflexaceae   Roseiflexaceae bacterium
32855863 32855863 PRJNA356682_P_NODE_40500_length_246_cov_0.890173_g39809_i0 PRJNA356682 40500 246 0.890173 2.18982558 Chloroflexota bacterium 2026724 Bacteria Bacteria 109 1.43e-28   NR MFO7321091.1 2026724 g39809 i0 86 0.695121951219512 57 8 69.5 0 172 2 1 57 MFO7321091.1 50S ribosomal protein L13 [Chloroflexota bacterium] diamond 171 109 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;