contig_metadata
11 rows where bioproject = "PRJNA356682", tax_phylum = "Bdellovibrionota" and tax_superkingdom = "Bacteria"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4899939 | 4899939 | PRJNA356682_P_NODE_11404_length_415_cov_1.956140_g10714_i0 | PRJNA356682 | 11404 | 415 | 1.95614 | 8.117981 | Bacteriovorax | 146784 | Bacteria | Bacteria | 569 | 8.91e-158 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g10714 | i0 | 91.587 | 134.638554216867 | 416 | 29 | 99 | 6 | 3 | 415 | 1661726 | 1662138 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 55875 | 569 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 9326034 | 9326034 | PRJNA356682_P_NODE_45868_length_234_cov_2.167702_g45177_i0 | PRJNA356682 | 45868 | 234 | 2.167702 | 5.07242268 | Micavibrio aeruginosavorus | 349221 | Bacteria | Bacteria | 113 | 9.48e-21 | NTclustered | gi|1950812799|gb|CP066681.1| | 349221 | g45177 | i0 | 83.74 | 37.5897435897436 | 123 | 17 | 52 | 3 | 17 | 137 | 2321707 | 2321828 | Micavibrio aeruginosavorus isolate NC_groundwater_70_Ag_B-0.1um_54_66 chromosome | blastn | 8796 | 113 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 12551059 | 12551059 | PRJNA356682_P_NODE_47050_length_220_cov_4.346939_g46359_i0 | PRJNA356682 | 47050 | 220 | 4.346939 | 9.5632658 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 274 | 3.82e-69 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g46359 | i0 | 89.14 | 159.468181818182 | 221 | 22 | 99 | 2 | 1 | 219 | 308 | 88 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 35083 | 274 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 15100347 | 15100347 | PRJNA356682_P_NODE_4852_length_643_cov_18.489474_g4178_i0 | PRJNA356682 | 4852 | 643 | 18.489474 | 118.88731782 | Bacteriovorax | 146784 | Bacteria | Bacteria | 1140 | 0 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g4178 | i0 | 98.607 | 372.790046656299 | 646 | 5 | 99 | 3 | 1 | 642 | 1661494 | 1662139 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 239704 | 1140 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 17650047 | 17650047 | PRJNA356682_P_NODE_42394_length_243_cov_4.547059_g41703_i0 | PRJNA356682 | 42394 | 243 | 4.547059 | 11.04935337 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 390 | 4.089999999999999e-104 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g41703 | i0 | 95.868 | 214.20987654321 | 242 | 8 | 99 | 2 | 1 | 240 | 2624 | 2865 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 52053 | 390 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 19523325 | 19523325 | PRJNA356682_P_NODE_2656_length_908_cov_12.922156_g1055_i1 | PRJNA356682 | 2656 | 908 | 12.922156 | 117.33317648 | Bdellovibrio sp. qaytius | 1916293 | Bacteria | Bacteria | 1404 | 0 | NTclustered | gi|1552089877|gb|CP025734.1| | 1916293 | g1055 | i1 | 94.895 | 188.838105726872 | 901 | 40 | 99 | 5 | 1 | 897 | 666157 | 667055 | Bdellovibrio sp. qaytius chromosome, complete genome | blastn | 171465 | 1404 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. qaytius | ||
| 19523776 | 19523776 | PRJNA356682_P_NODE_46356_length_230_cov_2.242038_g45665_i0 | PRJNA356682 | 46356 | 230 | 2.242038 | 5.1566874 | Pseudobdellovibrio sp. HCB154 | 3386277 | Bacteria | Bacteria | 387 | 4.96e-103 | NTclustered | gi|2872995934|gb|CP176530.1| | 3386277 | g45665 | i0 | 96.957 | 280.339130434783 | 230 | 7 | 100 | 0 | 1 | 230 | 698931 | 699160 | Pseudobdellovibrio sp. HCB154 chromosome, complete genome | blastn | 64478 | 387 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio sp. HCB154 | ||
| 21473919 | 21473919 | PRJNA356682_P_NODE_23397_length_301_cov_3.899123_g22706_i0 | PRJNA356682 | 23397 | 301 | 3.899123 | 11.73636023 | Bacteriovorax | 146784 | Bacteria | Bacteria | 545 | 1.0499999999999999e-150 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g22706 | i0 | 99.336 | 151.770764119601 | 301 | 2 | 100 | 0 | 1 | 301 | 1660663 | 1660363 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 45683 | 545 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 22074621 | 22074621 | PRJNA356682_P_NODE_8778_length_471_cov_7.608040_g8089_i0 | PRJNA356682 | 8778 | 471 | 7.60804 | 35.8338684 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 839 | 0 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g8089 | i0 | 98.732 | 172.091295116773 | 473 | 4 | 100 | 1 | 1 | 471 | 512138 | 511666 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 81055 | 839 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 25298568 | 25298568 | PRJNA356682_P_NODE_34400_length_255_cov_4.758242_g33709_i0 | PRJNA356682 | 34400 | 255 | 4.758242 | 12.1335171 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 267 | 7.6e-67 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g33709 | i0 | 85.882 | 84.6117647058824 | 255 | 31 | 99 | 5 | 3 | 255 | 1506 | 1255 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 21576 | 267 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 30296461 | 30296461 | PRJNA356682_P_NODE_14112_length_377_cov_1.013158_g13422_i0 | PRJNA356682 | 14112 | 377 | 1.013158 | 3.81960566 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 209 | 1.13e-66 | NR | MBP9675022.1 | 2081706 | g13422 | i0 | 84.3 | 0.962864721485411 | 121 | 18 | 95.5 | 1 | 373 | 14 | 6 | 126 | MBP9675022.1 EF-hand domain-containing protein [Bacteriovoracaceae bacterium] | diamond | 363 | 209 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;