RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA356682", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

  • Metazoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA356682 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5501115 5501115 PRJNA356682_P_NODE_25945_length_288_cov_5.060465_g25254_i0 PRJNA356682 25945 288 5.060465 14.5741392 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 122 2e-23   NTclustered gi|2519007827|ref|XM_057455710.1| 13093 g25254 i0 96 26.4861111111111 75 3 26 0 214 288 1234 1160 PREDICTED: Hydractinia symbiolongicarpus actin, non-muscle 6.2 (LOC130649433), mRNA blastn 7628 122 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
8050851 8050851 PRJNA356682_P_NODE_29627_length_273_cov_1.360000_g28936_i0 PRJNA356682 29627 273 1.36 3.7128 Ceratomyxa leatherjacketi 1579382 Cnidaria other_Eukaryota 78.7 4.13e-10   NTclustered gi|730837044|gb|KM392428.1| 1579382 g28936 i0 87.143 0.406593406593407 70 8 26 1 204 273 380 448 Ceratomyxa leatherjacketi isolate LJ-GB-B 28S ribosomal RNA gene, partial sequence blastn 111 78.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Ceratomyxidae Ceratomyxa Ceratomyxa leatherjacketi
9325602 9325602 PRJNA356682_P_NODE_28368_length_278_cov_1.502439_g27677_i0 PRJNA356682 28368 278 1.502439 4.17678042 Leptothecata sp. USNM IZ 1429781 2877641 Cnidaria other_Eukaryota 219 2.38e-52   NTclustered gi|2097191037|gb|OK209669.1| 2877641 g27677 i0 82.731 90.794964028777 249 39 89 4 1 247 390 636 Leptothecata sp. USNM IZ 1429781 voucher USNM:IZ:1429781 cytochrome c oxidase subunit I (COX1) gene, partial cds; mitochondrial blastn 25241 219 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata     Leptothecata sp. USNM IZ 1429781
22074541 22074541 PRJNA356682_P_NODE_46518_length_228_cov_4.219355_g45827_i0 PRJNA356682 46518 228 4.219355 9.6201294 Sphaeromyxa zaharoni 275449 Cnidaria other_Eukaryota 58.4 4.37e-4   NTclustered gi|2663986569|emb|OY751524.1| 275449 g45827 i0 100 3.0219298245614 31 0 14 0 112 142 6335 6365 Sphaeromyxa zaharoni isolate 24.2.2011 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA complete sequences blastn 689 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Sphaeromyxidae Sphaeromyxa Sphaeromyxa zaharoni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;