RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA356682", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA356682 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28811418 28811418 PRJNA356682_P_NODE_35608_length_251_cov_2.988764_g34917_i0 PRJNA356682 35608 251 2.988764 7.50179764 Fidelibacterota bacterium 2026760 Bacteria Bacteria 42.7 0.0407   NR MCF7837972.1 2026760 g34917 i0 42.3 0.621513944223108 52 27 59.8 2 93 242 25 75 MCF7837972.1 ComEC/Rec2 family competence protein [Fidelibacterota bacterium] diamond 156 42.7 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31085925 31085925 PRJNA356682_P_NODE_42395_length_243_cov_4.511765_g41704_i0 PRJNA356682 42395 243 4.511765 10.96358895 Fidelibacterota bacterium 2026760 Bacteria Bacteria 41.6 0.0139   NR MBF89665.1 2026760 g41704 i0 61.1 0.444444444444444 36 14 44.4 0 65 172 11 46 MBF89665.1 hypothetical protein [Fidelibacterota bacterium] diamond 108 41.6 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;