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contig_metadata

16 rows where bioproject = "PRJNA356682", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 16 ✖

tax_clade 1

  • Amoebozoa · 16 ✖

bioproject 1

  • PRJNA356682 · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1672732 1672732 PRJNA356682_P_NODE_8882_length_469_cov_2.755051_g8193_i0 PRJNA356682 8882 469 2.755051 12.92118919 Paramoeba aparasomata 2583407 Discosea other_Eukaryota 237 1.17e-57   NTclustered gi|1767098935|gb|MK518072.1| 2583407 g8193 i0 80.781 40.3006396588486 333 39 66 14 1 309 15319 14988 Paramoeba aparasomata mitochondrion, complete genome blastn 18901 237 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba aparasomata
5501587 5501587 PRJNA356682_P_NODE_47285_length_211_cov_14.478261_g46594_i0 PRJNA356682 47285 211 14.478261 30.54913071 Cochliopodium minus 313997 Discosea other_Eukaryota 316 5.95e-82   NTclustered gi|330902862|gb|JF298257.1| 313997 g46594 i0 96.842 11.2274881516588 190 4 90 2 2 190 192 4 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 2369 316 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
6774993 6774993 PRJNA356682_P_NODE_21246_length_314_cov_2.294606_g20555_i0 PRJNA356682 21246 314 2.294606 7.20506284 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 135 1.71e-38   NR XP_004333102.1 1257118 g20555 i0 66.7 6.42993630573248 96 32 91.7 0 27 314 8 103 XP_004333102.1 ribosomal protein L32, putative [Acanthamoeba castellanii str. Neff] diamond 2019 135 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8051111 8051111 PRJNA356682_P_NODE_40307_length_246_cov_0.890173_g39616_i0 PRJNA356682 40307 246 0.890173 2.18982558 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 222 1.5999999999999996e-53   NTclustered gi|300078498|gb|GU001160.1| 5755 g39616 i0 84.1 5.19105691056911 239 28 97 7 1 238 6089 6318 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1277 222 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9325825 9325825 PRJNA356682_P_NODE_37468_length_249_cov_1.357955_g36777_i0 PRJNA356682 37468 249 1.357955 3.38130795 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 104 6.13e-18   NTclustered gi|300078498|gb|GU001160.1| 5755 g36777 i0 78.495 15.6184738955823 186 21 69 15 1 173 5416 5595 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 3889 104 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13151299 13151299 PRJNA356682_P_NODE_30871_length_268_cov_1.328205_g30180_i0 PRJNA356682 30871 268 1.328205 3.5595894 Paramoeba aparasomata 2583407 Discosea other_Eukaryota 137 6.58e-28   NTclustered gi|1767098935|gb|MK518072.1| 2583407 g30180 i0 76.736 26.8097014925373 288 42 100 17 1 268 14804 14522 Paramoeba aparasomata mitochondrion, complete genome blastn 7185 137 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba aparasomata
13151343 13151343 PRJNA356682_P_NODE_32631_length_261_cov_2.388298_g31940_i0 PRJNA356682 32631 261 2.388298 6.23345778 Vannella sp. strain 4354/I 325074 Discosea other_Eukaryota 466 7.17e-127   NTclustered gi|62865936|gb|AY929911.1| 325074 g31940 i0 98.851 85.6053639846743 261 3 100 0 1 261 750 1010 Vannella sp. strain 4354/I 18S small subunit ribosomal RNA gene, partial sequence blastn 22343 466 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain 4354/I
13151626 13151626 PRJNA356682_P_NODE_43991_length_242_cov_0.911243_g43300_i0 PRJNA356682 43991 242 0.911243 2.20520806 Paramoeba perurans 437603 Discosea other_Eukaryota 148 1.3899999999999999e-40   NR WQA41796.1 437603 g43300 i0 90.9 0.954545454545455 77 7 95.5 0 236 6 1 77 WQA41796.1 tubulin beta-2C chain [Paramoeba perurans] diamond 231 148 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba perurans
15700516 15700516 PRJNA356682_P_NODE_41253_length_245_cov_0.895349_g40562_i0 PRJNA356682 41253 245 0.895349 2.19360505 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 226 1.23e-54   NTclustered gi|470487278|ref|XM_004344637.1| 1257118 g40562 i0 94.521 0.804081632653061 146 8 80 0 100 245 1113 968 Acanthamoeba castellanii str. Neff elongation factor Tu Cterminal domain containing protein (ACA1_279260), partial mRNA blastn 197 226 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16974687 16974687 PRJNA356682_P_NODE_16674_length_349_cov_29.623188_g15983_i0 PRJNA356682 16674 349 29.623188 103.38492612 Vannella simplex 197532 Discosea other_Eukaryota 628 1.1999999999999999e-175   NTclustered gi|284192604|gb|GQ265402.1| 197532 g15983 i0 99.14 100.573065902579 349 3 100 0 1 349 809 461 Vannella simplex strain Ladoga Cl 12/2 clone A144.5 18S ribosomal RNA gene, partial sequence blastn 35100 628 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella simplex
22074375 22074375 PRJNA356682_P_NODE_39138_length_247_cov_1.385057_g38447_i0 PRJNA356682 39138 247 1.385057 3.42109079 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 300 7.22e-77   NTclustered gi|300078498|gb|GU001160.1| 5755 g38447 i0 94.416 23.6153846153846 197 7 80 4 51 247 5594 5402 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 5833 300 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23349532 23349532 PRJNA356682_P_NODE_31099_length_267_cov_1.432990_g30408_i0 PRJNA356682 31099 267 1.43299 3.8260833 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 320 6.07e-83   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g30408 i0 88.764 67.3033707865169 267 22 100 5 1 267 34137 33879 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 17970 320 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
24024158 24024158 PRJNA356682_P_NODE_38999_length_247_cov_2.137931_g38308_i0 PRJNA356682 38999 247 2.137931 5.28068957 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 440 4.079999999999999e-119   NTclustered gi|300078498|gb|GU001160.1| 5755 g38308 i0 98.785 8.01619433198381 247 3 100 0 1 247 4089 4335 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1980 440 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24623587 24623587 PRJNA356682_P_NODE_21200_length_314_cov_6.481328_g20509_i0 PRJNA356682 21200 314 6.481328 20.35136992 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 460 4.119999999999999e-125   NTclustered gi|300078498|gb|GU001160.1| 5755 g20509 i0 92.705 17.9522292993631 329 9 100 12 1 314 6144 6472 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 5637 460 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24624222 24624222 PRJNA356682_P_NODE_6400_length_556_cov_8.745342_g5715_i0 PRJNA356682 6400 556 8.745342 48.62410152 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 907 0   NTclustered gi|300078498|gb|GU001160.1| 5755 g5715 i0 96.092 18.1780575539568 563 11 100 9 1 556 5925 5367 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 10107 907 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31307120 31307120 PRJNA356682_P_NODE_40295_length_246_cov_0.890173_g39604_i0 PRJNA356682 40295 246 0.890173 2.18982558 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 63.2 2.27e-9   NR XP_004338843.1 1257118 g39604 i0 42.5 0.975609756097561 80 38 96.3 2 242 6 177 249 XP_004338843.1 peptidylprolyl cis-trans isomerase, FKBP-type domain containing protein [Acanthamoeba castellanii str. Neff] diamond 240 63.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;