contig_metadata
8 rows where bioproject = "PRJNA352850", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 395078 | 395078 | PRJNA352850_P_NODE_22261_length_602_cov_1.875226_g19471_i0 | PRJNA352850 | 22261 | 602 | 1.875226 | 11.28886052 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 863 | 0 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g19471 | i0 | 92.574 | 118.187707641196 | 606 | 38 | 100 | 6 | 1 | 602 | 7090094 | 7090696 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 71149 | 863 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 2346593 | 2346593 | PRJNA352850_P_NODE_3982_length_2142_cov_7.124224_g1_i264 | PRJNA352850 | 3982 | 2142 | 7.124224 | 152.60087808 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 3646 | 0 | NTclustered | gi|13959815|gb|AY033407.1| | 34 | g1 | i264 | 97.064 | 100.024276377218 | 2146 | 59 | 100 | 4 | 1 | 2142 | 1581 | 3726 | Myxococcus xanthus USC7-1p and USC7-2p genes, complete cds | blastn | 214252 | 3646 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus xanthus | ||
| 11874096 | 11874096 | PRJNA352850_P_NODE_3730_length_2253_cov_207.582577_g1_i252 | PRJNA352850 | 3730 | 2253 | 207.582577 | 4676.83545981 | Myxococcus xanthus | 34 | Bacteria | Bacteria | 2054 | 0 | NTclustered | gi|13959815|gb|AY033407.1| | 34 | g1 | i252 | 97.813 | 105.106524633822 | 1189 | 24 | 53 | 2 | 1 | 1187 | 2580 | 1392 | Myxococcus xanthus USC7-1p and USC7-2p genes, complete cds | blastn | 236805 | 2054 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus xanthus | ||
| 14423954 | 14423954 | PRJNA352850_P_NODE_26252_length_536_cov_2.353183_g23429_i0 | PRJNA352850 | 26252 | 536 | 2.353183 | 12.61306088 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 771 | 0 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g23429 | i0 | 93.182 | 162.738805970149 | 528 | 31 | 98 | 4 | 1 | 525 | 3942690 | 3942165 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 87228 | 771 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 26821820 | 26821820 | PRJNA352850_P_NODE_56721_length_312_cov_2.121673_g53888_i0 | PRJNA352850 | 56721 | 312 | 2.121673 | 6.61961976 | Sorangium cellulosum | 56 | Bacteria | Bacteria | 103 | 5.8e-24 | NR | WP_275936215.1 | 56 | g53888 | i0 | 81.1 | 1.52884615384615 | 53 | 10 | 51 | 0 | 311 | 153 | 309 | 361 | WP_275936215.1 RHS repeat-associated core domain-containing protein, partial [Sorangium cellulosum] | diamond | 477 | 103 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 27643707 | 27643707 | PRJNA352850_P_NODE_80724_length_248_cov_1.829146_g77891_i0 | PRJNA352850 | 80724 | 248 | 1.829146 | 4.53628208 | Anaeromyxobacter dehalogenans | 161493 | Bacteria | Bacteria | 55.8 | 1.78e-7 | NR | WP_232287436.1 | 161493 | g77891 | i0 | 43.3 | 1.62096774193548 | 67 | 34 | 81 | 3 | 246 | 46 | 75 | 137 | WP_232287436.1 hypothetical protein [Anaeromyxobacter dehalogenans] | diamond | 402 | 55.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter dehalogenans | ||
| 29600786 | 29600786 | PRJNA352850_P_NODE_6250_length_1557_cov_2.805703_g4428_i0 | PRJNA352850 | 6250 | 1557 | 2.805703 | 43.68479571 | Nannocystis pusilla | 889268 | Bacteria | Bacteria | 132 | 6.01e-29 | NR | WP_224195048.1 | 889268 | g4428 | i0 | 33.3 | 0.919075144508671 | 237 | 150 | 45.5 | 4 | 1555 | 848 | 302 | 531 | WP_224195048.1 hypothetical protein [Nannocystis pusilla] | diamond | 1431 | 132 | 1 | Bacteria | Pseudomonadati | Myxococcota | Nannocystales | Nannocystaceae | Nannocystis | Nannocystis pusilla | |||
| 31781420 | 31781420 | PRJNA352850_P_NODE_15377_length_788_cov_5.648173_g12750_i0 | PRJNA352850 | 15377 | 788 | 5.648173 | 44.50760324 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 117 | 4.97e-28 | NR | HBQ17276.1 | 2026763 | g12750 | i0 | 32.6 | 0.852791878172589 | 224 | 143 | 84.5 | 5 | 3 | 668 | 20 | 237 | HBQ17276.1 N-formylglutamate amidohydrolase [Myxococcales bacterium] | diamond | 672 | 117 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;