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contig_metadata

15 rows where bioproject = "PRJNA352850", tax_kingdom = "Pseudomonadati" and tax_phylum = "Abditibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Abditibacteriota · 15 ✖

tax_kingdom 1

  • Pseudomonadati · 15 ✖

bioproject 1

  • PRJNA352850 · 15 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1670393 1670393 PRJNA352850_P_NODE_44122_length_372_cov_3.024768_g41289_i0 PRJNA352850 44122 372 3.024768 11.25213696 Abditibacteriota bacterium 2783868 Bacteria Bacteria 307 6.84e-79   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g41289 i0 87.179 516.790322580645 273 32 73 2 1 272 2850965 2850695 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 192246 307 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
8048281 8048281 PRJNA352850_P_NODE_21527_length_616_cov_6.199295_g18743_i0 PRJNA352850 21527 616 6.199295 38.1876572 Abditibacteriota bacterium 2783868 Bacteria Bacteria 713 0   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g18743 i0 89.138 278.965909090909 580 53 94 10 40 616 2851016 2851588 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 171843 713 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
10599682 10599682 PRJNA352850_P_NODE_50769_length_337_cov_3.847222_g47936_i0 PRJNA352850 50769 337 3.847222 12.96513814 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 177 1.7599999999999998e-52   NR MBV9866343.1 2800791 g47936 i0 75 1.98516320474777 112 28 99.7 0 337 2 30 141 MBV9866343.1 xanthine dehydrogenase family protein subunit M [Abditibacteriaceae bacterium] diamond 669 177 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
18246370 18246370 PRJNA352850_P_NODE_12815_length_901_cov_6.191315_g10319_i0 PRJNA352850 12815 901 6.191315 55.78374815 Bacteria 2 Bacteria Bacteria 266 8.670000000000001e-85   NR MDF2440612.1 2783868 g10319 i0 95.5 1.77136514983352 133 6 44.3 0 503 901 1 133 MDF2440612.1 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [Abditibacteriota bacterium] diamond 1596 268 0.992537313432836 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
18246378 18246378 PRJNA352850_P_NODE_12995_length_891_cov_6.045131_g10485_i0 PRJNA352850 12995 891 6.045131 53.86211721 Abditibacteriota bacterium 2783868 Bacteria Bacteria 205 4.58e-60   NR MDF2441258.1 2783868 g10485 i0 69.4 0.451178451178451 134 41 45.1 0 489 890 1 134 MDF2441258.1 twitching motility protein PilT [Abditibacteriota bacterium] diamond 402 205 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
23347309 23347309 PRJNA352850_P_NODE_33779_length_449_cov_4.587500_g30949_i0 PRJNA352850 33779 449 4.5875 20.597875 Abditibacteriota bacterium 2783868 Bacteria Bacteria 510 5.97e-140   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g30949 i0 87.668 173.654788418708 446 45 98 8 9 448 2852025 2851584 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 77971 510 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
27517200 27517200 PRJNA352850_P_NODE_66203_length_279_cov_2.017391_g63370_i0 PRJNA352850 66203 279 2.017391 5.62852089 Abditibacteriota bacterium 2783868 Bacteria Bacteria 130 1.17e-35   NR MDF2439576.1 2783868 g63370 i0 79.3 0.881720430107527 82 17 88.2 0 14 259 13 94 MDF2439576.1 hypothetical protein [Abditibacteriota bacterium] diamond 246 130 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
28053832 28053832 PRJNA352850_P_NODE_22225_length_602_cov_3.564195_g19435_i0 PRJNA352850 22225 602 3.564195 21.4564539 Abditibacteriota bacterium 2783868 Bacteria Bacteria 350 2.53e-120   NR MDF2439721.1 2783868 g19435 i0 94.1 0.93687707641196 188 11 93.7 0 564 1 1 188 MDF2439721.1 hypothetical protein [Abditibacteriota bacterium] diamond 564 350 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
28369609 28369609 PRJNA352850_P_NODE_60666_length_297_cov_2.512097_g57833_i0 PRJNA352850 60666 297 2.512097 7.46092809 Abditibacteriota bacterium 2783868 Bacteria Bacteria 73.2 4.26e-13   NR MDF2439840.1 2783868 g57833 i0 58.9 0.737373737373737 73 26 71.7 3 83 295 175 245 MDF2439840.1 hypothetical protein [Abditibacteriota bacterium] diamond 219 73.2 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
28401273 28401273 PRJNA352850_P_NODE_79986_length_249_cov_2.830000_g77153_i0 PRJNA352850 79986 249 2.83 7.0467 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 103 2.99e-24   NR HEX8834404.1 2800791 g77153 i0 66.7 2.57831325301205 72 24 86.7 0 2 217 252 323 HEX8834404.1 diguanylate cyclase [Abditibacteriaceae bacterium] diamond 642 103 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
28811390 28811390 PRJNA352850_P_NODE_12648_length_910_cov_8.211382_g10163_i0 PRJNA352850 12648 910 8.211382 74.7235762 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 328 6.94e-104   NR MBV9868269.1 2800791 g10163 i0 55.7 1.01208791208791 307 125 99.6 4 3 908 393 693 MBV9868269.1 methionine--tRNA ligase [Abditibacteriaceae bacterium] diamond 921 328 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
29096006 29096006 PRJNA352850_P_NODE_46628_length_358_cov_4.932039_g43795_i0 PRJNA352850 46628 358 4.932039 17.65669962 Abditibacteriota bacterium 2783868 Bacteria Bacteria 202 3.6699999999999997e-60   NR MDF2440154.1 2783868 g43795 i0 88.4 0.93854748603352 112 13 93.9 0 358 23 231 342 MDF2440154.1 cellobiose epimerase [Abditibacteriota bacterium] diamond 336 202 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
29411548 29411548 PRJNA352850_P_NODE_79969_length_249_cov_3.900000_g77136_i0 PRJNA352850 79969 249 3.9 9.711 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 114 2.47e-27   NR MBV9864490.1 2800791 g77136 i0 71.3 1.04819277108434 87 15 98.8 3 248 3 553 634 MBV9864490.1 S-layer homology domain-containing protein [Abditibacteriaceae bacterium] diamond 261 114 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
31148628 31148628 PRJNA352850_P_NODE_13295_length_876_cov_5.068924_g10767_i0 PRJNA352850 13295 876 5.068924 44.40377424 Abditibacteriota bacterium 2783868 Bacteria Bacteria 333 6.629999999999999e-110   NR MDF2441225.1 2783868 g10767 i0 94.3 0.599315068493151 175 10 59.9 0 2 526 209 383 MDF2441225.1 dehydrogenase [Abditibacteriota bacterium] diamond 525 333 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
32414501 32414501 PRJNA352850_P_NODE_11779_length_959_cov_4.783516_g9354_i0 PRJNA352850 11779 959 4.783516 45.87391844 Abditibacteriota bacterium 2783868 Bacteria Bacteria 273 4.33e-80   NR MDF2441722.1 2783868 g9354 i0 59.9 1.0385818561001 332 96 94.5 10 3 908 418 742 MDF2441722.1 pilus assembly protein CpaC [Abditibacteriota bacterium] diamond 996 273 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;