RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA352850", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA352850 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15099622 15099622 PRJNA352850_P_NODE_78632_length_252_cov_1.261084_g75799_i0 PRJNA352850 78632 252 1.261084 3.17793168 Catenaria 109875 Fungi Fungi 455 1.49e-123   NTclustered gi|1866582512|gb|MT730687.1| 109876 g75799 i0 99.206 86.1230158730159 252 2 100 0 1 252 2861 2610 Catenaria anguillulae isolate JEL0194 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 21703 455 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
28432899 28432899 PRJNA352850_P_NODE_74446_length_260_cov_0.966825_g71613_i0 PRJNA352850 74446 260 0.966825 2.513745 Catenaria anguillulae PL171 765915 Fungi Fungi 144 1.01e-41   NR ORZ39756.1 765915 g71613 i0 83.3 0.9 78 13 90 0 235 2 1 78 ORZ39756.1 hypothetical protein BCR44DRAFT_55669 [Catenaria anguillulae PL171] diamond 234 144 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
30091776 30091776 PRJNA352850_P_NODE_50752_length_338_cov_1.058824_g47919_i0 PRJNA352850 50752 338 1.058824 3.57882512 Eukaryota 2759 Fungi Fungi 140 6.51e-40   NR ORZ40411.1 765915 g47919 i0 63.4 2.97337278106509 112 41 99.4 0 2 337 46 157 ORZ40411.1 ribosomal protein L11 [Catenaria anguillulae PL171] diamond 1005 141 0.99290780141844 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;