contig_metadata
25 rows where bioproject = "PRJNA352850" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4222235 | 4222235 | PRJNA352850_P_NODE_19964_length_650_cov_6.128120_g17203_i0 | PRJNA352850 | 19964 | 650 | 6.12812 | 39.83278 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 337 | 3.659999999999999e-112 | NR | MBC8002191.1 | 2026801 | g17203 | i0 | 75.2 | 7.86 | 214 | 51 | 98.8 | 1 | 2 | 643 | 220 | 431 | MBC8002191.1 L-fuconate dehydratase [Verrucomicrobiales bacterium] | diamond | 5109 | 337 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 5499347 | 5499347 | PRJNA352850_P_NODE_44525_length_370_cov_1.990654_g41692_i0 | PRJNA352850 | 44525 | 370 | 1.990654 | 7.3654198 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 667 | 0 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g41692 | i0 | 99.189 | 116.721621621622 | 370 | 3 | 100 | 0 | 1 | 370 | 1251066 | 1250697 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 43187 | 667 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 7449436 | 7449436 | PRJNA352850_P_NODE_58986_length_304_cov_1.160784_g56153_i0 | PRJNA352850 | 58986 | 304 | 1.160784 | 3.52878336 | Frigoriglobus | 2774146 | Bacteria | Bacteria | 484 | 2.36e-132 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g56153 | i0 | 95.395 | 121.394736842105 | 304 | 14 | 100 | 0 | 1 | 304 | 2003450 | 2003753 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 36904 | 484 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 11875184 | 11875184 | PRJNA352850_P_NODE_71550_length_265_cov_1.995370_g68717_i0 | PRJNA352850 | 71550 | 265 | 1.99537 | 5.2877305 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 165 | 2.98e-36 | NTclustered | gi|2874254106|emb|OY970189.1| | 100233 | g68717 | i0 | 90.4 | 0.471698113207547 | 125 | 12 | 47 | 0 | 138 | 262 | 7136708 | 7136832 | MAG: uncultured Planctomycetaceae bacterium isolate MFD09603.bin.2.127 genome assembly, chromosome: 1 | blastn | 125 | 165 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 14423631 | 14423631 | PRJNA352850_P_NODE_16072_length_762_cov_3.093969_g13426_i0 | PRJNA352850 | 16072 | 762 | 3.093969 | 23.57604378 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 1362 | 0 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g13426 | i0 | 98.95 | 125.863517060367 | 762 | 7 | 100 | 1 | 1 | 762 | 1249854 | 1249094 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 95908 | 1362 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 14424069 | 14424069 | PRJNA352850_P_NODE_29752_length_491_cov_4.402715_g26924_i0 | PRJNA352850 | 29752 | 491 | 4.402715 | 21.61733065 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 902 | 0 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g26924 | i0 | 99.796 | 116.423625254582 | 491 | 1 | 100 | 0 | 1 | 491 | 1251125 | 1251615 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 57164 | 902 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 18922606 | 18922606 | PRJNA352850_P_NODE_35015_length_438_cov_3.041131_g32184_i0 | PRJNA352850 | 35015 | 438 | 3.041131 | 13.32015378 | Planctomycetia | 203683 | Bacteria | Bacteria | 549 | 1.2299999999999994e-151 | NTclustered | gi|2874254106|emb|OY970189.1| | 100233 | g32184 | i0 | 90.046 | 102.735159817352 | 432 | 31 | 96 | 6 | 5 | 426 | 5936808 | 5936379 | MAG: uncultured Planctomycetaceae bacterium isolate MFD09603.bin.2.127 genome assembly, chromosome: 1 | blastn | 44998 | 549 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 20796271 | 20796271 | PRJNA352850_P_NODE_16017_length_764_cov_2.689510_g13373_i0 | PRJNA352850 | 16017 | 764 | 2.68951 | 20.5478564 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 1373 | 0 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g13373 | i0 | 99.601 | 139.952879581152 | 752 | 3 | 98 | 0 | 13 | 764 | 1249889 | 1250640 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 106924 | 1373 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 22072815 | 22072815 | PRJNA352850_P_NODE_62658_length_290_cov_4.290456_g59825_i0 | PRJNA352850 | 62658 | 290 | 4.290456 | 12.4423224 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 433 | 8.21e-117 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g59825 | i0 | 94.056 | 131.993103448276 | 286 | 16 | 98 | 1 | 3 | 287 | 2002489 | 2002774 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 38278 | 433 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 24621797 | 24621797 | PRJNA352850_P_NODE_41360_length_390_cov_2.826979_g38528_i0 | PRJNA352850 | 41360 | 390 | 2.826979 | 11.0252181 | uncultured Phycisphaerales bacterium | 904075 | Bacteria | Bacteria | 470 | 8.679999999999999e-128 | NTclustered | gi|2874253847|emb|OY969903.1| | 904075 | g38528 | i0 | 89.785 | 76.1512820512821 | 372 | 31 | 95 | 7 | 21 | 390 | 1831430 | 1831064 | MAG: uncultured Phycisphaerales bacterium isolate MFD01213.bin.c.1 genome assembly, chromosome: 1 | blastn | 29699 | 470 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | uncultured Phycisphaerales bacterium | |||
| 24621994 | 24621994 | PRJNA352850_P_NODE_47420_length_354_cov_2.573770_g44587_i0 | PRJNA352850 | 47420 | 354 | 2.57377 | 9.1111458 | Singulisphaera sp. Ch | 1906241 | Bacteria | Bacteria | 129 | 8.159999999999999e-32 | NR | WP_406700929.1 | 3120278 | g44587 | i0 | 78.5 | 1.57627118644068 | 93 | 20 | 78.8 | 0 | 350 | 72 | 897 | 989 | WP_406700929.1 beta strand repeat-containing protein [Singulisphaera sp. Ch08] | diamond | 558 | 129 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Singulisphaera | Singulisphaera sp. Ch08 | |
| 27201048 | 27201048 | PRJNA352850_P_NODE_78722_length_252_cov_1.004926_g75889_i0 | PRJNA352850 | 78722 | 252 | 1.004926 | 2.53241352 | Novipirellula caenicola | 1536901 | Bacteria | Bacteria | 121 | 7.789999999999999e-31 | NR | WP_345689132.1 | 1536901 | g75889 | i0 | 73.8 | 5 | 84 | 22 | 100 | 0 | 252 | 1 | 18 | 101 | WP_345689132.1 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [Novipirellula caenicola] | diamond | 1260 | 121 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Novipirellula | Novipirellula caenicola | |
| 27990929 | 27990929 | PRJNA352850_P_NODE_46825_length_357_cov_2.636364_g43992_i0 | PRJNA352850 | 46825 | 357 | 2.636364 | 9.41181948 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 44.7 | 0.0142 | NR | MCH1506043.1 | 2026801 | g43992 | i0 | 39 | 0.991596638655462 | 59 | 32 | 47.1 | 2 | 349 | 182 | 78 | 135 | MCH1506043.1 hypothetical protein [Verrucomicrobiales bacterium] | diamond | 354 | 44.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 28053839 | 28053839 | PRJNA352850_P_NODE_56465_length_313_cov_2.166667_g53632_i0 | PRJNA352850 | 56465 | 313 | 2.166667 | 6.78166771 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 99 | 1.6e-21 | NR | MEZ6130026.1 | 2026779 | g53632 | i0 | 65.2 | 0.853035143769968 | 89 | 31 | 85.3 | 0 | 296 | 30 | 2966 | 3054 | MEZ6130026.1 YDG domain-containing protein [Planctomycetaceae bacterium] | diamond | 267 | 99 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 29018615 | 29018615 | PRJNA352850_P_NODE_55908_length_315_cov_2.808271_g53075_i0 | PRJNA352850 | 55908 | 315 | 2.808271 | 8.84605365 | Tautonia | 2680020 | Bacteria | Bacteria | 118 | 1.79e-28 | NR | WP_152049823.1 | 2653855 | g53075 | i0 | 83.1 | 1.46666666666667 | 77 | 13 | 73.3 | 0 | 83 | 313 | 2 | 78 | WP_152049823.1 AI-2E family transporter [Tautonia marina] | diamond | 462 | 118 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Tautonia | Tautonia marina | |
| 29032970 | 29032970 | PRJNA352850_P_NODE_60388_length_298_cov_2.911647_g57555_i0 | PRJNA352850 | 60388 | 298 | 2.911647 | 8.67670806 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 84.3 | 2.26e-17 | NR | HLJ10262.1 | 2026779 | g57555 | i0 | 46.4 | 0.845637583892617 | 84 | 45 | 84.6 | 0 | 252 | 1 | 141 | 224 | HLJ10262.1 hypothetical protein [Planctomycetaceae bacterium] | diamond | 252 | 84.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 29600790 | 29600790 | PRJNA352850_P_NODE_67410_length_275_cov_3.951327_g64577_i0 | PRJNA352850 | 67410 | 275 | 3.951327 | 10.86614925 | Planctomycetes bacterium Pla133 | 2528011 | Bacteria | Bacteria | 145 | 1.11e-40 | NR | QDU66550.1 | 2528011 | g64577 | i0 | 76.4 | 2.89090909090909 | 89 | 21 | 97.1 | 0 | 274 | 8 | 208 | 296 | QDU66550.1 putative 3-hydroxybutyryl-CoA dehydrogenase [Planctomycetes bacterium Pla133] | diamond | 795 | 145 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Engelhardtia | Engelhardtia mirabilis | |||
| 29965673 | 29965673 | PRJNA352850_P_NODE_12491_length_919_cov_4.281609_g10016_i0 | PRJNA352850 | 12491 | 919 | 4.2816090000000004 | 39.34798671 | Planctomycetaceae | 126 | Bacteria | Bacteria | 212 | 8.910000000000001e-59 | NR | WP_310821170.1 | 2527980 | g10016 | i0 | 46.5 | 1.67791077257889 | 254 | 128 | 81.9 | 4 | 2 | 754 | 280 | 528 | WP_310821170.1 peroxidase family protein [Stratiformator vulcanicus] | diamond | 1542 | 212 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Stratiformator | Stratiformator vulcanicus | |
| 29980057 | 29980057 | PRJNA352850_P_NODE_58971_length_304_cov_1.203922_g56138_i0 | PRJNA352850 | 58971 | 304 | 1.203922 | 3.65992288 | Phycisphaerae bacterium | 2026778 | Bacteria | Bacteria | 103 | 2.94e-23 | NR | HNQ23619.1 | 2026778 | g56138 | i0 | 59 | 0.769736842105263 | 78 | 31 | 76 | 1 | 234 | 4 | 21 | 98 | HNQ23619.1 aspartate aminotransferase family protein [Phycisphaerae bacterium] | diamond | 234 | 103 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 30738220 | 30738220 | PRJNA352850_P_NODE_58514_length_305_cov_3.246094_g55681_i0 | PRJNA352850 | 58514 | 305 | 3.246094 | 9.9005867 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 87.8 | 2.41e-18 | NR | MBN9377724.1 | 2047757 | g55681 | i0 | 47 | 0.983606557377049 | 100 | 51 | 96.4 | 2 | 304 | 11 | 184 | 283 | MBN9377724.1 hypothetical protein [Chlamydiales bacterium] | diamond | 300 | 87.8 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 31560403 | 31560403 | PRJNA352850_P_NODE_81836_length_246_cov_2.111675_g79003_i0 | PRJNA352850 | 81836 | 246 | 2.111675 | 5.1947205 | Tepidisphaeraceae bacterium | 2876886 | Bacteria | Bacteria | 51.6 | 2.81e-5 | NR | HYE19843.1 | 2876886 | g79003 | i0 | 41.8 | 0.817073170731707 | 67 | 39 | 81.7 | 0 | 203 | 3 | 58 | 124 | HYE19843.1 HlyD family efflux transporter periplasmic adaptor subunit [Tepidisphaeraceae bacterium] | diamond | 201 | 51.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Tepidisphaeraceae bacterium | ||
| 31592009 | 31592009 | PRJNA352850_P_NODE_65536_length_281_cov_2.241379_g62703_i0 | PRJNA352850 | 65536 | 281 | 2.241379 | 6.29827499 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 62.4 | 6.85e-10 | NR | MDP9291775.1 | 2026799 | g62703 | i0 | 75 | 0.875444839857651 | 40 | 10 | 42.7 | 0 | 281 | 162 | 76 | 115 | MDP9291775.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 246 | 62.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32256552 | 32256552 | PRJNA352850_P_NODE_34678_length_441_cov_4.563776_g31847_i0 | PRJNA352850 | 34678 | 441 | 4.563776 | 20.12625216 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 53.5 | 4.6e-5 | NR | NRA95951.1 | 2026780 | g31847 | i0 | 39.5 | 0.551020408163265 | 81 | 47 | 55.1 | 2 | 11 | 253 | 203 | 281 | NRA95951.1 hypothetical protein [Planctomycetota bacterium] | diamond | 243 | 53.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 32494991 | 32494991 | PRJNA352850_P_NODE_7099_length_1419_cov_6.465693_g5141_i0 | PRJNA352850 | 7099 | 1419 | 6.465693 | 91.74818367 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 401 | 1.86e-132 | NR | TDJ68285.1 | 2026780 | g5141 | i0 | 45.2 | 19.6384778012685 | 442 | 236 | 93 | 3 | 1417 | 98 | 28 | 465 | TDJ68285.1 MAG: M20/M25/M40 family metallo-hydrolase [Planctomycetota bacterium] | diamond | 27867 | 401 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 32635282 | 32635282 | PRJNA352850_P_NODE_65140_length_283_cov_1.111111_g62307_i0 | PRJNA352850 | 65140 | 283 | 1.111111 | 3.14444413 | Candidatus Omnitrophota bacterium | 2035772 | Bacteria | Bacteria | 65.1 | 7.43e-10 | NR | MFC1510138.1 | 2035772 | g62307 | i0 | 37.3 | 5.26855123674912 | 83 | 52 | 88 | 0 | 3 | 251 | 304 | 386 | MFC1510138.1 8-amino-7-oxononanoate synthase [Candidatus Omnitrophota bacterium] | diamond | 1491 | 65.1 | 1 | Bacteria | PVC group | Pseudomonadati | Candidatus Omnitrophota | Candidatus Omnitrophota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;