RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA352850", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 12 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 12 ✖

bioproject 1

  • PRJNA352850 · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4224007 4224007 PRJNA352850_P_NODE_78244_length_253_cov_1.000000_g75411_i0 PRJNA352850 78244 253 1 2.53 Mizuhopecten yessoensis 6573 Mollusca Mollusca 52.8 0.023   NTclustered gi|1207981311|ref|XM_021484536.1| 6573 g75411 i0 96.875 0.126482213438735 32 0 13 1 161 192 943 973 PREDICTED: Mizuhopecten yessoensis homeotic protein female sterile-like (LOC110441415), mRNA blastn 32 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
7449622 7449622 PRJNA352850_P_NODE_73986_length_261_cov_0.929245_g71153_i0 PRJNA352850 73986 261 0.929245 2.42532945 Metazoa 33208 Mollusca Mollusca 462 9.28e-126   NTclustered gi|1928112766|gb|MT947789.1| 6523 g71153 i0 98.842 97.7241379310345 259 3 99 0 3 261 1 259 Lymnaea stagnalis isolate Lsta_466444 hypothetical protein mRNA, complete cds blastn 25506 466 0.991416309012876 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
13825235 13825235 PRJNA352850_P_NODE_79711_length_250_cov_1.293532_g76878_i0 PRJNA352850 79711 250 1.293532 3.23383 Metazoa 33208 Mollusca Mollusca 462 8.83e-126   NTclustered gi|1928112764|gb|MT947788.1| 6523 g76878 i0 100 99.976 250 0 100 0 1 250 1083 1332 Lymnaea stagnalis isolate Lsta_434075 hypothetical protein mRNA, complete cds blastn 24994 462 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
19522637 19522637 PRJNA352850_P_NODE_79896_length_250_cov_1.014925_g77063_i0 PRJNA352850 79896 250 1.014925 2.5373125 Opisthokonta 33154 Mollusca Mollusca 147 1.87e-43   NR XP_060589897.1 129788 g77063 i0 78.3 28.884 83 18 99.6 0 250 2 27 109 XP_060589897.1 eukaryotic translation initiation factor 5A-1-like [Ruditapes philippinarum] diamond 7221 148 0.993243243243243 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Ruditapes Ruditapes philippinarum
27345044 27345044 PRJNA352850_P_NODE_65663_length_281_cov_1.603448_g62830_i0 PRJNA352850 65663 281 1.603448 4.50568888 Metazoa 33208 Mollusca Mollusca 53.1 1.34e-5   NR XP_055954433.1 6465 g62830 i0 77.8 50.1565836298932 27 6 28.8 0 9 89 988 1014 XP_055954433.1 spectrin alpha chain [Patella vulgata] diamond 14094 53.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
29064461 29064461 PRJNA352850_P_NODE_47708_length_353_cov_1.552632_g44875_i0 PRJNA352850 47708 353 1.552632 5.48079096 Potamilus streckersoni 2493646 Mollusca Mollusca 59.7 1.89e-8   NR KAK3597137.1 2493646 g44875 i0 41.8 1.89518413597734 67 39 56.9 0 119 319 75 141 KAK3597137.1 hypothetical protein CHS0354_038055 [Potamilus streckersoni] diamond 669 59.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Unionida Unionidae Potamilus Potamilus streckersoni
29190739 29190739 PRJNA352850_P_NODE_9369_length_1147_cov_2.387978_g7156_i0 PRJNA352850 9369 1147 2.387978 27.39010766 Mya arenaria 6604 Mollusca Mollusca 131 4.15e-29   NR XP_052821291.1 6604 g7156 i0 45.5 1.22144725370532 156 80 40.8 3 1142 675 1385 1535 XP_052821291.1 agrin-like isoform X2 [Mya arenaria] diamond 1401 131 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
29681048 29681048 PRJNA352850_P_NODE_46070_length_361_cov_4.817308_g43237_i0 PRJNA352850 46070 361 4.817308 17.39048188 Metazoa 33208 Mollusca Mollusca 107 9.71e-25   NR CAG2237602.1 6550 g43237 i0 45 27.4321329639889 120 66 99.7 0 360 1 320 439 CAG2237602.1 DCAF13 [Mytilus edulis] diamond 9903 108 0.990740740740741 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
31433597 31433597 PRJNA352850_P_NODE_87116_length_205_cov_4.076923_g84283_i0 PRJNA352850 87116 205 4.076923 8.35769215 Plakobranchus ocellatus 259542 Mollusca Mollusca 44.7 0.00486   NR GFO19369.1 259542 g84283 i0 43.1 2.50243902439024 51 28 74.6 1 22 174 232 281 GFO19369.1 gypsy retrotransposon integrase-like protein 1 [Plakobranchus ocellatus] diamond 513 44.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Plakobranchus Plakobranchus ocellatus
31672171 31672171 PRJNA352850_P_NODE_46017_length_362_cov_1.456869_g43184_i0 PRJNA352850 46017 362 1.456869 5.27386578 Metazoa 33208 Mollusca Mollusca 87.8 2.41e-17   NR CAL1543698.1 6523 g43184 i0 52.1 6.19889502762431 73 33 59.7 2 358 143 305 376 CAL1543698.1 unnamed protein product [Lymnaea stagnalis] diamond 2244 88.6 0.99097065462754 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
32477860 32477860 PRJNA352850_P_NODE_46579_length_359_cov_1.538710_g43746_i0 PRJNA352850 46579 359 1.53871 5.5239689 Haliotis asinina 109174 Mollusca Mollusca 89 7.13e-20   NR AAX11340.1 109174 g43746 i0 65.3 1.25348189415042 75 26 62.7 0 357 133 58 132 AAX11340.1 ribosomal protein L28 [Haliotis asinina] diamond 450 89 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina
32683979 32683979 PRJNA352850_P_NODE_39140_length_406_cov_1.417367_g36308_i0 PRJNA352850 39140 406 1.417367 5.75451002 Mollusca 6447 Mollusca Mollusca 59.7 6.02e-9   NR KAL5008760.1 13268 g36308 i0 37.3 2.02463054187192 67 42 49.5 0 86 286 1 67 KAL5008760.1 hypothetical protein ScPMuIL_014341 [Solemya velum] diamond 822 60.1 0.993344425956739 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Solemyida Solemyidae Solemya Solemya velum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;