contig_metadata
5 rows where bioproject = "PRJNA352850" and tax_clade = "Metamonada"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8049032 | 8049032 | PRJNA352850_P_NODE_46067_length_361_cov_4.987179_g43234_i0 | PRJNA352850 | 46067 | 361 | 4.987179 | 18.00371619 | root | 1 | Root_unresolved | Root_unresolved | 152 | 1.71e-44 | NR | XP_001307865.1 | 412133 | g43234 | i0 | 62.9 | 2.86703601108033 | 116 | 43 | 96.4 | 0 | 353 | 6 | 44 | 159 | XP_001307865.1 GTP binding [Trichomonas vaginalis G3] | diamond | 1035 | 152 | 1 | Eukaryota | Metamonada | Parabasalia | Trichomonadida | Trichomonadidae | Trichomonas | Trichomonas vaginalis | |||
| 9322815 | 9322815 | PRJNA352850_P_NODE_14348_length_828_cov_5.345315_g11769_i0 | PRJNA352850 | 14348 | 828 | 5.345315 | 44.2592082 | Anaeramoeba flamelloides | 1746091 | Root_unresolved | Root_unresolved | 109 | 4.7e-24 | NR | KAJ6244881.1 | 1746091 | g11769 | i0 | 31 | 7.47463768115942 | 277 | 176 | 97.1 | 8 | 3 | 806 | 26 | 296 | KAJ6244881.1 protease family c26 gamma-glutamyl hydrolase [Anaeramoeba flamelloides] | diamond | 6189 | 109 | 1 | Eukaryota | Metamonada | Anaeramoebidae | Anaeramoeba | Anaeramoeba flamelloides | |||||
| 10599509 | 10599509 | PRJNA352850_P_NODE_45009_length_367_cov_3.213836_g42176_i0 | PRJNA352850 | 45009 | 367 | 3.213836 | 11.79477812 | Tritrichomonas foetus | 1144522 | Parabasalia | other_Eukaryota | 357 | 6.6e-94 | NTclustered | gi|2806468597|ref|XM_068493487.1| | 1144522 | g42176 | i0 | 84.765 | 21.8964577656676 | 361 | 49 | 97 | 2 | 13 | 367 | 393 | 33 | Tritrichomonas foetus Histone H2B (HTB1), partial mRNA | blastn | 8036 | 357 | 1 | Eukaryota | Metamonada | Parabasalia | Tritrichomonadida | Tritrichomonadidae | Tritrichomonas | Tritrichomonas foetus | |||
| 31275462 | 31275462 | PRJNA352850_P_NODE_23595_length_577_cov_4.214015_g20784_i0 | PRJNA352850 | 23595 | 577 | 4.214015 | 24.31486655 | Anaeramoeba ignava | 1746090 | Root_unresolved | Root_unresolved | 202 | 1.71e-62 | NR | KAJ5072712.1 | 1746090 | g20784 | i0 | 50.3 | 0.972270363951473 | 187 | 93 | 97.2 | 0 | 1 | 561 | 7 | 193 | KAJ5072712.1 inosine triphosphate pyrophosphatase/ham1 protein [Anaeramoeba ignava] | diamond | 561 | 202 | 1 | Eukaryota | Metamonada | Anaeramoebidae | Anaeramoeba | Anaeramoeba ignava | |||||
| 31735329 | 31735329 | PRJNA352850_P_NODE_73737_length_261_cov_1.443396_g70904_i0 | PRJNA352850 | 73737 | 261 | 1.443396 | 3.76726356 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 58.5 | 1.26e-7 | NR | ESU40613.1 | 5741 | g70904 | i0 | 40.5 | 2.83908045977011 | 79 | 44 | 89.7 | 3 | 248 | 15 | 502 | 578 | ESU40613.1 Variant-specific surface protein [Giardia intestinalis] | diamond | 741 | 58.5 | 1 | Eukaryota | Metamonada | Fornicata | Diplomonadida | Hexamitidae | Giardia | Giardia duodenalis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;