RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA352850", tax_clade = "Haptista" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_phylum 1

tax_clade 1

  • Haptista · 2 ✖

bioproject 1

  • PRJNA352850 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28165872 28165872 PRJNA352850_P_NODE_82205_length_246_cov_1.035533_g79372_i0 PRJNA352850 82205 246 1.035533 2.54741118 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 100 4.3499999999999997e-23   NR KAJ1639618.1 483367 g79372 i0 53.3 2.82926829268293 75 32 87.8 2 30 245 160 234 KAJ1639618.1 hypothetical protein T492DRAFT_584662 [Pavlovales sp. CCMP2436] diamond 696 100 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales     Pavlovales sp. CCMP2436
28432886 28432886 PRJNA352850_P_NODE_32846_length_458_cov_5.765281_g30016_i0 PRJNA352850 32846 458 5.765281 26.40498698 Diacronema lutheri 2081491 Haptophyta other_Eukaryota 197 2.23e-61   NR KAG8457765.1 2081491 g30016 i0 60.3 6.94323144104804 151 60 98.9 0 4 456 29 179 KAG8457765.1 hypothetical protein KFE25_005778 [Diacronema lutheri] diamond 3180 197 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales Pavlovaceae Diacronema Diacronema lutheri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;