RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA352850", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Fervidibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Fervidibacterota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA352850 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30313664 30313664 PRJNA352850_P_NODE_46452_length_359_cov_4.212903_g43619_i0 PRJNA352850 46452 359 4.212903 15.12432177 Bacillati 1783272 Bacteria Bacteria 124 3.69e-30   NR WP_259099607.1 1448929 g43619 i0 55.8 5.47353760445682 104 45 86.9 1 2 313 515 617 WP_259099607.1 transketolase [Candidatus Fervidibacter sacchari] diamond 1965 124 1 Bacteria Bacteria candidate phyla   Candidatus Fervidibacterota       Candidatus Fervidibacter Candidatus Fervidibacter sacchari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;