RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA352850" and tax_clade = "Apusozoa"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Apusozoa · 4 ✖

bioproject 1

  • PRJNA352850 · 4 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8049478 8049478 PRJNA352850_P_NODE_61107_length_296_cov_1.619433_g58274_i0 PRJNA352850 61107 296 1.619433 4.79352168 Thecamonas trahens 529818 Root_unresolved Root_unresolved 161 4.38e-35   NTclustered gi|761380055|ref|NC_026452.1| 529818 g58274 i0 77.431 41.3614864864865 288 53 96 11 7 289 1793 1513 Thecamonas trahens strain ATCC 50062 mitochondrion, complete genome blastn 12243 161 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31338688 31338688 PRJNA352850_P_NODE_17236_length_723_cov_7.146884_g14553_i0 PRJNA352850 17236 723 7.146884 51.67197132 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 74.3 1.18e-12   NR XP_013758370.1 461836 g14553 i0 37.9 0.394190871369295 95 59 39.4 0 579 295 47 141 XP_013758370.1 uncharacterized protein AMSG_04698 [Thecamonas trahens ATCC 50062] diamond 285 74.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31767053 31767053 PRJNA352850_P_NODE_76097_length_257_cov_0.980769_g73264_i0 PRJNA352850 76097 257 0.980769 2.52057633 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 99 1.6400000000000001e-22   NR XP_013760592.1 461836 g73264 i0 68.1 2.59143968871595 72 21 81.7 1 48 257 43 114 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 666 99.8 0.991983967935872 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32509574 32509574 PRJNA352850_P_NODE_19079_length_672_cov_7.581059_g14553_i1 PRJNA352850 19079 672 7.581059 50.94471648 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 74.3 8.46e-13   NR XP_013758370.1 461836 g14553 i1 37.9 0.424107142857143 95 59 42.4 0 145 429 47 141 XP_013758370.1 uncharacterized protein AMSG_04698 [Thecamonas trahens ATCC 50062] diamond 285 74.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;