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contig_metadata

26 rows where bioproject = "PRJNA352850" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 26 ✖

bioproject 1

  • PRJNA352850 · 26 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
395185 395185 PRJNA352850_P_NODE_25441_length_547_cov_10.277108_g22622_i0 PRJNA352850 25441 547 10.277108 56.21578076 Ripella sp. 805 1217113 Discosea other_Eukaryota 857 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g22622 i0 95.404 99.5393053016453 544 16 99 9 8 547 1 539 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 54448 857 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
1669897 1669897 PRJNA352850_P_NODE_28182_length_510_cov_6.646421_g25356_i0 PRJNA352850 28182 510 6.646421 33.8967471 Ripella decalvata 2047822 Discosea other_Eukaryota 610 6.569999999999997e-170   NTclustered gi|1269228423|gb|MF683548.1| 2047822 g25356 i0 94.71 77.6196078431373 397 13 77 7 1 392 1165 1558 Ripella decalvata clone 26.2.2 18S ribosomal RNA gene, partial sequence blastn 39586 610 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella decalvata
5498852 5498852 PRJNA352850_P_NODE_28325_length_508_cov_6.653595_g25499_i0 PRJNA352850 28325 508 6.653595 33.8002626 Ripella sp. 805 1217113 Discosea other_Eukaryota 850 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g25499 i0 96.857 102.092519685039 509 14 100 2 1 508 1044 537 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 51863 850 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
5499520 5499520 PRJNA352850_P_NODE_50385_length_339_cov_2.431034_g47552_i0 PRJNA352850 50385 339 2.431034 8.24120526 Physarum cinereum 289951 Evosea other_Eukaryota 579 1.1899999999999996e-160   NTclustered gi|374255699|emb|HE614599.1| 289951 g47552 i0 98.48 72.7994100294985 329 4 97 1 11 339 1098 771 Physarum cinereum partial 18S rRNA gene, strain Idn-2 blastn 24679 579 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum cinereum
6772764 6772764 PRJNA352850_P_NODE_25946_length_540_cov_2.619145_g23124_i0 PRJNA352850 25946 540 2.619145 14.143383 Polyschismium peyerimhoffii 2911783 Evosea other_Eukaryota 388 3.5599999999999997e-103   NTclustered gi|2161226355|gb|MZ313553.1| 2911783 g23124 i0 80.316 31.5962962962963 569 67 100 33 1 540 7001 6449 Polyschismium peyerimhoffii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17062 388 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Polyschismium Polyschismium peyerimhoffii
8048060 8048060 PRJNA352850_P_NODE_14367_length_827_cov_6.399743_g11785_i0 PRJNA352850 14367 827 6.399743 52.92587461 Physarum cinereum 289951 Evosea other_Eukaryota 1423 0   NTclustered gi|374255699|emb|HE614599.1| 289951 g11785 i0 99.871 80.1874244256348 773 1 93 0 54 826 1 773 Physarum cinereum partial 18S rRNA gene, strain Idn-2 blastn 66315 1423 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum cinereum
8048441 8048441 PRJNA352850_P_NODE_26507_length_532_cov_7.105590_g23684_i0 PRJNA352850 26507 532 7.10559 37.8017388 Physarum cinereum 289951 Evosea other_Eukaryota 977 0   NTclustered gi|374255699|emb|HE614599.1| 289951 g23684 i0 99.812 97.562030075188 533 0 100 1 1 532 1216 1748 Physarum cinereum partial 18S rRNA gene, strain Idn-2 blastn 51903 977 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum cinereum
8048461 8048461 PRJNA352850_P_NODE_27207_length_523_cov_3.839662_g24383_i0 PRJNA352850 27207 523 3.839662 20.08143226 Fuligo septica 159720 Evosea other_Eukaryota 263 2.18e-65   NTclustered gi|37515398|emb|AJ584697.1| 159720 g24383 i0 89.252 7.62523900573614 214 18 41 4 1 212 13793 14003 Fuligo septica 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, isolate NY-1 blastn 3988 263 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica
11873469 11873469 PRJNA352850_P_NODE_16950_length_732_cov_3.768668_g14276_i0 PRJNA352850 16950 732 3.768668 27.58664976 Cochliopodium spiniferum 313558 Discosea other_Eukaryota 739 0   NTclustered gi|330902897|gb|JF298273.1| 313558 g14276 i0 84.973 99.9945355191257 732 106 99 4 3 732 52 781 Cochliopodium spiniferum clone 5102 actin gene, partial cds blastn 73196 739 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium spiniferum
13148663 13148663 PRJNA352850_P_NODE_22411_length_599_cov_2.760000_g19621_i0 PRJNA352850 22411 599 2.76 16.5324 Physarum polycephalum 5791 Evosea other_Eukaryota 276 3.23e-69   NTclustered gi|3221|emb|V01159.1| 5791 g19621 i0 84.669 22.8363939899833 287 33 47 8 163 442 1333 1051 Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA blastn 13679 276 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
15699155 15699155 PRJNA352850_P_NODE_69493_length_269_cov_3.963636_g66660_i0 PRJNA352850 69493 269 3.963636 10.66218084 Physarum albescens 289948 Evosea other_Eukaryota 473 4.439999999999999e-129   NTclustered gi|381139256|emb|HE655073.1| 289948 g66660 i0 98.507 65.5613382899628 268 4 99 0 2 269 1490 1223 Physarum albescens partial 28S rRNA gene, isolate Fr-K2 blastn 17636 473 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum albescens
16972124 16972124 PRJNA352850_P_NODE_13214_length_880_cov_3.690734_g10692_i0 PRJNA352850 13214 880 3.690734 32.4784592 Physarum polycephalum 5791 Evosea other_Eukaryota 867 0   NTclustered gi|3221|emb|V01159.1| 5791 g10692 i0 84.684 37.7522727272727 901 103 100 29 1 880 2410 1524 Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA blastn 33222 867 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
19522610 19522610 PRJNA352850_P_NODE_7896_length_1306_cov_19.676213_g5836_i0 PRJNA352850 7896 1306 19.676213 256.97134178 Stemonitopsis subcaespitosa 1048528 Evosea other_Eukaryota 1075 0   NTclustered gi|426281760|gb|JX681133.1| 1048528 g5836 i0 88.44 82.9073506891271 891 103 68 0 189 1079 896 6 Stemonitopsis subcaespitosa actin gene, partial cds blastn 108277 1075 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Stemonitopsis Stemonitopsis subcaespitosa
22072868 22072868 PRJNA352850_P_NODE_64298_length_285_cov_2.338983_g61465_i0 PRJNA352850 64298 285 2.338983 6.66610155 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 85.5 1.97e-17   NR KAH3722847.1 1580589 g61465 i0 42 1.43157894736842 88 50 92.6 1 275 12 216 302 KAH3722847.1 thioredoxin 1 [Pelomyxa schiedti] diamond 408 85.5 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
25298001 25298001 PRJNA352850_P_NODE_80820_length_248_cov_1.457286_g77987_i0 PRJNA352850 80820 248 1.457286 3.61406928 root 1 Root_unresolved Root_unresolved 62.1 3.73e-5   NTclustered gi|330798879|ref|XM_003287429.1| 5786 g77987 i0 94.872 15.1935483870968 39 2 16 0 91 129 1132 1094 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_32526), partial mRNA blastn 3768 62.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
26758184 26758184 PRJNA352850_P_NODE_63741_length_287_cov_1.747899_g60908_i0 PRJNA352850 63741 287 1.747899 5.01647013 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 92.4 2.22e-19   NR KAH3743669.1 1580589 g60908 i0 48 1.04529616724739 100 47 99.3 1 287 3 871 970 KAH3743669.1 protein mono-ADP-ribosyltransferase PARP6 [Pelomyxa schiedti] diamond 300 92.4 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
26853542 26853542 PRJNA352850_P_NODE_72861_length_263_cov_0.953271_g70028_i0 PRJNA352850 72861 263 0.953271 2.50710273 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 46.2 0.00273   NR XP_004348706.1 1257118 g70028 i0 40.8 1.11787072243346 49 29 55.9 0 239 93 338 386 XP_004348706.1 uncharacterized protein ACA1_126730 [Acanthamoeba castellanii str. Neff] diamond 294 46.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27422709 27422709 PRJNA352850_P_NODE_33903_length_448_cov_3.428571_g31073_i0 PRJNA352850 33903 448 3.428571 15.35999808 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 65.9 3.19e-9   NR XP_004339528.1 1257118 g31073 i0 37.1 0.703125 105 61 67 1 397 98 2745 2849 XP_004339528.1 HEAT repeat domain containing protein [Acanthamoeba castellanii str. Neff] diamond 315 65.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27485623 27485623 PRJNA352850_P_NODE_17143_length_726_cov_4.344165_g14461_i0 PRJNA352850 17143 726 4.344165 31.5386379 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 186 3.5199999999999996e-52   NR XP_012755355.1 1410327 g14461 i0 44.8 0.801652892561983 194 97 80.2 4 54 635 257 440 XP_012755355.1 hypothetical protein SAMD00019534_044110 [Acytostelium subglobosum LB1] diamond 582 186 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
27895973 27895973 PRJNA352850_P_NODE_28805_length_502_cov_5.889625_g25979_i0 PRJNA352850 28805 502 5.889625 29.5659175 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 208 4.33e-61   NR XP_004358064.1 1257118 g25979 i0 70.3 0.884462151394422 148 43 87.8 1 17 457 431 578 XP_004358064.1 HEAT repeat containing protein, partial [Acanthamoeba castellanii str. Neff] diamond 444 208 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28274855 28274855 PRJNA352850_P_NODE_41006_length_393_cov_1.662791_g38174_i0 PRJNA352850 41006 393 1.662791 6.53476863 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 137 5.4799999999999994e-37   NR PRP84833.1 1890364 g38174 i0 55.4 0.99236641221374 130 53 95.4 2 1 375 134 263 PRP84833.1 hypothetical protein PROFUN_07487 [Planoprotostelium fungivorum] diamond 390 137 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29853763 29853763 PRJNA352850_P_NODE_46271_length_360_cov_4.064309_g43438_i0 PRJNA352850 46271 360 4.064309 14.6315124 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 114 3.4200000000000003e-29   NR XP_004352065.1 1257118 g43438 i0 52.1 1.00833333333333 121 56 100 2 1 360 54 173 XP_004352065.1 ribosomal protein S7e, putative [Acanthamoeba castellanii str. Neff] diamond 363 114 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30043160 30043160 PRJNA352850_P_NODE_5511_length_1700_cov_4.203513_g3812_i0 PRJNA352850 5511 1700 4.203513 71.459721 Dictyostelium purpureum 5786 Evosea other_Eukaryota 369 3.62e-117   NR XP_003284160.1 5786 g3812 i0 38.9 1.97470588235294 561 325 97.9 12 3 1667 42 590 XP_003284160.1 uncharacterized protein DICPUDRAFT_27222 [Dictyostelium purpureum] diamond 3357 369 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
30391247 30391247 PRJNA352850_P_NODE_65193_length_282_cov_3.296137_g62360_i0 PRJNA352850 65193 282 3.296137 9.29510634 Cavenderia fasciculata 261658 Evosea other_Eukaryota 50.4 9.47e-5   NR XP_004355166.1 261658 g62360 i0 44.4 0.478723404255319 45 25 47.9 0 145 279 155 199 XP_004355166.1 uncharacterized protein DFA_07670 [Cavenderia fasciculata] diamond 135 50.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
30485601 30485601 PRJNA352850_P_NODE_23593_length_577_cov_4.568182_g20782_i0 PRJNA352850 23593 577 4.568182 26.35841014 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 172 4.88e-48   NR PRP80250.1 1890364 g20782 i0 54.5 0.811091854419411 156 57 79.5 4 3 461 301 445 PRP80250.1 hypothetical protein PROFUN_12189 [Planoprotostelium fungivorum] diamond 468 172 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32872941 32872941 PRJNA352850_P_NODE_27860_length_514_cov_3.739785_g25036_i0 PRJNA352850 27860 514 3.739785 19.2224949 Eumycetozoa 142796 Evosea other_Eukaryota 231 4.649999999999999e-72   NR XP_001134587.1 352472 g25036 i0 73.6 2.58560311284047 148 39 86.4 0 3 446 220 367 XP_001134587.1 4-hydroxyphenylpyruvate dioxygenase [Dictyostelium discoideum AX4] diamond 1329 231 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;