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contig_metadata

12 rows where bioproject = "PRJNA352610" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA352610 · 12 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27011425 27011425 PRJNA352610_P_NODE_2542_length_619_cov_3.633700_g2482_i0 PRJNA352610 2542 619 3.6337 22.492603 archaeon 1906665 Archaea Archaea 147 2.1e-40   NR RYH18247.1 1906665 g2482 i0 44.4 0.906300484652666 187 93 85.8 4 619 89 49 234 RYH18247.1 MAG: glutathione S-transferase family protein [archaeon] diamond 561 147 1 Archaea               archaeon
27345039 27345039 PRJNA352610_P_NODE_9183_length_381_cov_1.058442_g9122_i0 PRJNA352610 9183 381 1.058442 4.03266402 root 1 Root_unresolved Root_unresolved 150 2.3e-40   NR MAO99966.1 2026739 g9122 i0 58.8 10.3622047244094 119 49 93.7 0 3 359 76 194 MAO99966.1 cytosol nonspecific dipeptidase [Methanobacteriota archaeon] diamond 3948 151 0.993377483443709 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28685570 28685570 PRJNA352610_P_NODE_21347_length_272_cov_1.547739_g21286_i0 PRJNA352610 21347 272 1.547739 4.20985008 Candidatus Thalassarchaeaceae archaeon 2670411 Archaea Archaea 64.3 1.28e-9   NR MCP2503036.1 2670411 g21286 i0 68.3 4.34558823529412 41 13 45.2 0 2 124 372 412 MCP2503036.1 pyridoxal phosphate-dependent aminotransferase [Candidatus Thalassarchaeaceae archaeon] diamond 1182 64.3 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon
28779972 28779972 PRJNA352610_P_NODE_1447_length_760_cov_2.129549_g1395_i0 PRJNA352610 1447 760 2.129549 16.1845724 archaeon 1906665 Archaea Archaea 159 2.18e-44   NR RYH18247.1 1906665 g1395 i0 41.4 0.828947368421053 210 111 78.6 3 714 118 15 223 RYH18247.1 MAG: glutathione S-transferase family protein [archaeon] diamond 630 159 1 Archaea               archaeon
29380013 29380013 PRJNA352610_P_NODE_9029_length_383_cov_1.335484_g8968_i0 PRJNA352610 9029 383 1.335484 5.11490372 archaeon 1906665 Archaea Archaea 108 1.79e-26   NR RYH18247.1 1906665 g8968 i0 47.6 3.52480417754569 103 54 80.7 0 383 75 24 126 RYH18247.1 MAG: glutathione S-transferase family protein [archaeon] diamond 1350 108 1 Archaea               archaeon
29411532 29411532 PRJNA352610_P_NODE_8029_length_401_cov_0.875000_g7968_i0 PRJNA352610 8029 401 0.875 3.50875 archaeon 1906665 Archaea Archaea 73.6 1.17e-12   NR RYH20030.1 1906665 g7968 i0 41.8 0.591022443890274 79 44 59.1 1 401 165 61 137 RYH20030.1 MAG: hypothetical protein EON65_24855 [archaeon] diamond 237 73.6 1 Archaea               archaeon
30485565 30485565 PRJNA352610_P_NODE_19733_length_282_cov_2.196172_g19672_i0 PRJNA352610 19733 282 2.196172 6.19320504 Candidatus Tiamatella sp. 3150758 Archaea Archaea 58.2 3.13e-8   NR MEB3825148.1 3150758 g19672 i0 44.4 0.765957446808511 72 40 76.6 0 233 18 65 136 MEB3825148.1 DMT family transporter [Candidatus Tiamatella sp.] diamond 216 58.2 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Acidilobales Acidilobaceae Candidatus Tiamatella Candidatus Tiamatella sp.
31370616 31370616 PRJNA352610_P_NODE_25896_length_250_cov_0.870056_g25835_i0 PRJNA352610 25896 250 0.870056 2.17514 Nanobdellota archaeon 2026764 Archaea Archaea 55.8 8.58e-7   NR MEK6829599.1 2026764 g25835 i0 39 0.984 82 49 97.2 1 6 248 147 228 MEK6829599.1 hypothetical protein [Nanoarchaeota archaeon] diamond 246 55.8 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
31623365 31623365 PRJNA352610_P_NODE_2956_length_584_cov_1.696673_g2895_i0 PRJNA352610 2956 584 1.696673 9.90857032 archaeon 1906665 Archaea Archaea 137 1.11e-36   NR RYH18247.1 1906665 g2895 i0 44 0.898972602739726 175 85 83.7 4 496 8 15 188 RYH18247.1 MAG: glutathione S-transferase family protein [archaeon] diamond 525 137 1 Archaea               archaeon
32034672 32034672 PRJNA352610_P_NODE_14798_length_318_cov_1.175510_g14737_i0 PRJNA352610 14798 318 1.17551 3.7381218 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 51.6 5.25e-5   NR HLC90789.1 2910166 g14737 i0 42.3 0.735849056603774 78 45 73.6 0 236 3 153 230 HLC90789.1 hypothetical protein [Candidatus Nanoarchaeia archaeon] diamond 234 51.6 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon
32256536 32256536 PRJNA352610_P_NODE_6218_length_441_cov_1.046196_g6157_i0 PRJNA352610 6218 441 1.046196 4.61372436 archaeon 1906665 Archaea Archaea 123 1.19e-31   NR RYG60812.1 1906665 g6157 i0 48.7 0.782312925170068 115 59 78.2 0 438 94 137 251 RYG60812.1 MAG: hypothetical protein EON64_19060, partial [archaeon] diamond 345 123 1 Archaea               archaeon
32351271 32351271 PRJNA352610_P_NODE_8399_length_393_cov_1.575000_g8338_i0 PRJNA352610 8399 393 1.575 6.18975 Methanothrix sp. 90426 Archaea Archaea 48.1 0.00237   NR MDD4162744.1 90426 g8338 i0 46.8 0.358778625954198 47 24 35.1 1 186 49 354 400 MDD4162744.1 PAN domain-containing protein [Methanothrix sp.] diamond 141 48.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;