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contig_metadata

25 rows where bioproject = "PRJNA352610", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 25 ✖

tax_phylum 1

  • Myxococcota · 25 ✖

tax_kingdom 1

bioproject 1

  • PRJNA352610 · 25 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26758169 26758169 PRJNA352610_P_NODE_7341_length_415_cov_1.368421_g7280_i0 PRJNA352610 7341 415 1.368421 5.67894715 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 42 0.048   NR MBM4321556.1 2026735 g7280 i0 42.3 0.375903614457831 52 29 37.6 1 198 43 22 72 MBM4321556.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 156 42 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
26853481 26853481 PRJNA352610_P_NODE_10121_length_367_cov_1.170068_g10060_i0 PRJNA352610 10121 367 1.170068 4.29414956 Myxococcales bacterium 2026763 Bacteria Bacteria 60.5 2.2e-8   NR MCA9671053.1 2026763 g10060 i0 35.9 0.841961852861035 103 55 76 2 28 306 55 156 MCA9671053.1 hypothetical protein [Myxococcales bacterium] diamond 309 60.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
26853517 26853517 PRJNA352610_P_NODE_32101_length_241_cov_0.863095_g32040_i0 PRJNA352610 32101 241 0.863095 2.08005895 Polyangiaceae bacterium 2268199 Bacteria Bacteria 56.2 6.15e-7   NR HLK41500.1 2268199 g32040 i0 43.8 0.995850622406639 80 37 95.9 3 233 3 67 141 HLK41500.1 carboxylesterase/lipase family protein [Polyangiaceae bacterium] diamond 240 56.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
27548684 27548684 PRJNA352610_P_NODE_2344_length_636_cov_1.184725_g2285_i0 PRJNA352610 2344 636 1.184725 7.534851 Polyangiaceae bacterium 2268199 Bacteria Bacteria 60.5 2.08e-7   NR HMJ57057.1 2268199 g2285 i0 36.2 0.325471698113208 69 43 32.1 1 515 312 108 176 HMJ57057.1 hypothetical protein [Polyangiaceae bacterium] diamond 207 60.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
27976314 27976314 PRJNA352610_P_NODE_4065_length_520_cov_1.205817_g4004_i0 PRJNA352610 4065 520 1.205817 6.2702484 Bacteria 2 Bacteria Bacteria 106 2.8199999999999994e-24   NR HEX3758815.1 2212474 g4004 i0 36.5 5.52692307692308 181 98 99.2 5 5 520 58 230 HEX3758815.1 hypothetical protein [Kofleriaceae bacterium] diamond 2874 107 0.990654205607477 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
28022496 28022496 PRJNA352610_P_NODE_28225_length_246_cov_2.219653_g28164_i0 PRJNA352610 28225 246 2.219653 5.46034638 Myxococcales bacterium 2026763 Bacteria Bacteria 51.2 1.84e-5   NR MCA9671053.1 2026763 g28164 i0 36.6 0.865853658536585 71 39 79.3 1 49 243 70 140 MCA9671053.1 hypothetical protein [Myxococcales bacterium] diamond 213 51.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28102529 28102529 PRJNA352610_P_NODE_9325_length_379_cov_0.993464_g9264_i0 PRJNA352610 9325 379 0.993464 3.76522856 Pseudomonadati 3379134 Bacteria Bacteria 59.7 1.94e-7   NR MES1174858.1 2026763 g9264 i0 55.6 5.69129287598945 54 24 42.7 0 3 164 360 413 MES1174858.1 cation:proton antiporter [Myxococcales bacterium] diamond 2157 60.1 0.993344425956739 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28401239 28401239 PRJNA352610_P_NODE_5146_length_474_cov_1.511222_g5085_i0 PRJNA352610 5146 474 1.511222 7.16319228 Cystobacter sp. 1965334 Bacteria Bacteria 76.3 8.09e-13   NR MET0402051.1 1965334 g5085 i0 34.4 1.03164556962025 163 88 94.9 8 18 467 136 292 MET0402051.1 phosphatidylinositol-specific phospholipase C [Cystobacter sp.] diamond 489 76.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Cystobacter Cystobacter sp.
28496079 28496079 PRJNA352610_P_NODE_18967_length_287_cov_1.313084_g18906_i0 PRJNA352610 18967 287 1.313084 3.76855108 Corallococcus carmarthensis 2316728 Bacteria Bacteria 46.2 0.00383   NR WP_158625800.1 2316728 g18906 i0 37.2 2.61324041811847 86 51 89.9 3 258 1 235 317 WP_158625800.1 TIR domain-containing protein [Corallococcus carmarthensis] diamond 750 46.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Corallococcus Corallococcus carmarthensis
29001504 29001504 PRJNA352610_P_NODE_17328_length_298_cov_1.195556_g17267_i0 PRJNA352610 17328 298 1.195556 3.56275688 Polyangiaceae bacterium 2268199 Bacteria Bacteria 50.8 1.01e-4   NR HEY2407106.1 2268199 g17267 i0 33.7 1.69127516778523 83 49 78.5 2 295 62 238 319 HEY2407106.1 glycosyl hydrolase family 28 protein [Polyangiaceae bacterium] diamond 504 50.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
29790304 29790304 PRJNA352610_P_NODE_7111_length_420_cov_1.893372_g7050_i0 PRJNA352610 7111 420 1.893372 7.9521624 Anaeromyxobacteraceae bacterium 2510643 Bacteria Bacteria 47.8 0.00396   NR MFL5274676.1 2510643 g7050 i0 39.4 0.707142857142857 99 52 70 4 417 124 79 170 MFL5274676.1 hypothetical protein [Anaeromyxobacteraceae bacterium] diamond 297 47.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae   Anaeromyxobacteraceae bacterium
30232740 30232740 PRJNA352610_P_NODE_22852_length_263_cov_1.605263_g22791_i0 PRJNA352610 22852 263 1.605263 4.22184169 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 50.4 2.56e-5   NR MFP6608719.1 2026735 g22791 i0 39.6 1.36882129277567 53 32 60.5 0 225 67 81 133 MFP6608719.1 DUF1330 domain-containing protein [Deltaproteobacteria bacterium] diamond 360 50.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30391230 30391230 PRJNA352610_P_NODE_5173_length_473_cov_1.737500_g5112_i0 PRJNA352610 5173 473 1.7375 8.218375 Myxococcales bacterium 2026763 Bacteria Bacteria 48.1 0.00508   NR MCO4760791.1 2026763 g5112 i0 60 0.221987315010571 35 14 22.2 0 237 133 302 336 MCO4760791.1 lamin tail domain-containing protein [Myxococcales bacterium] diamond 105 48.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
30787076 30787076 PRJNA352610_P_NODE_17454_length_297_cov_1.263393_g17393_i0 PRJNA352610 17454 297 1.263393 3.75227721 Pseudomonadati 3379134 Bacteria Bacteria 119 3.73e-29   NR MCA9626175.1 2026763 g17393 i0 64.6 5.66666666666667 96 32 97 1 5 292 236 329 MCA9626175.1 tryptophanase [Myxococcales bacterium] diamond 1683 119 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31275424 31275424 PRJNA352610_P_NODE_18295_length_291_cov_1.743119_g18234_i0 PRJNA352610 18295 291 1.743119 5.07247629 Myxococcales bacterium 2026763 Bacteria Bacteria 71.6 4.72e-12   NR MCA9676067.1 2026763 g18234 i0 46.8 1.68041237113402 79 37 81.4 1 267 31 160 233 MCA9676067.1 histidinol-phosphate aminotransferase family protein [Myxococcales bacterium] diamond 489 71.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31307072 31307072 PRJNA352610_P_NODE_8295_length_395_cov_1.195652_g8234_i0 PRJNA352610 8295 395 1.195652 4.7228254 Polyangia bacterium 3058050 Bacteria Bacteria 183 3.359999999999999e-54   NR HEX2568019.1 3058050 g8234 i0 64.3 4.93670886075949 129 46 98 0 394 8 106 234 HEX2568019.1 methyltransferase domain-containing protein [Polyangia bacterium] diamond 1950 183 1 Bacteria   Pseudomonadati Myxococcota         Polyangia bacterium
31497059 31497059 PRJNA352610_P_NODE_29476_length_244_cov_1.801170_g29415_i0 PRJNA352610 29476 244 1.80117 4.3948548 Minicystis rosea 888845 Bacteria Bacteria 45.8 0.00318   NR APR85582.1 888845 g29415 i0 43.7 0.872950819672131 71 35 86.1 2 22 231 8 74 APR85582.1 kinesin light chain-like protein [Minicystis rosea] diamond 213 45.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Minicystis Minicystis rosea
31528648 31528648 PRJNA352610_P_NODE_8996_length_384_cov_0.926045_g8935_i0 PRJNA352610 8996 384 0.926045 3.5560128 Myxococcales bacterium 2026763 Bacteria Bacteria 44.7 0.0326   NR MCA9647516.1 2026763 g8935 i0 37.5 0.625 80 44 60.9 4 37 270 266 341 MCA9647516.1 hypothetical protein [Myxococcales bacterium] diamond 240 44.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31908092 31908092 PRJNA352610_P_NODE_7577_length_410_cov_1.448071_g7516_i0 PRJNA352610 7577 410 1.448071 5.9370911 Myxococcales bacterium 2026763 Bacteria Bacteria 47 0.00742   NR MCO4760791.1 2026763 g7516 i0 51.2 0.724390243902439 43 21 31.5 0 165 37 302 344 MCO4760791.1 lamin tail domain-containing protein [Myxococcales bacterium] diamond 297 47 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32003044 32003044 PRJNA352610_P_NODE_26238_length_249_cov_1.448864_g26177_i0 PRJNA352610 26238 249 1.448864 3.60767136 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 45.1 0.00596   NR MBS2024131.1 2026735 g26177 i0 50 2.91566265060241 38 19 45.8 0 130 17 320 357 MBS2024131.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 726 45.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32288121 32288121 PRJNA352610_P_NODE_22299_length_266_cov_1.958549_g22238_i0 PRJNA352610 22299 266 1.958549 5.20974034 Myxococcota bacterium 2818507 Bacteria Bacteria 43.9 0.0158   NR MEE2835165.1 2818507 g22238 i0 35.3 0.766917293233083 68 41 73.3 1 47 241 18 85 MEE2835165.1 hypothetical protein [Myxococcota bacterium] diamond 204 43.9 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
32635234 32635234 PRJNA352610_P_NODE_19940_length_281_cov_1.413462_g19879_i0 PRJNA352610 19940 281 1.413462 3.97182822 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 154 7.719999999999998e-42   NR MBI2389879.1 2026735 g19879 i0 74.7 1.9644128113879 91 23 97.2 0 6 278 408 498 MBI2389879.1 RICIN domain-containing protein [Deltaproteobacteria bacterium] diamond 552 154 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32730008 32730008 PRJNA352610_P_NODE_11500_length_349_cov_2.010870_g11439_i0 PRJNA352610 11500 349 2.01087 7.0179363 Myxococcota bacterium 2818507 Bacteria Bacteria 43.1 0.0496   NR MEE2959811.1 2818507 g11439 i0 29.4 0.584527220630373 68 48 58.5 0 4 207 45 112 MEE2959811.1 hypothetical protein [Myxococcota bacterium] diamond 204 43.1 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
32747059 32747059 PRJNA352610_P_NODE_9260_length_380_cov_0.905537_g9199_i0 PRJNA352610 9260 380 0.905537 3.4410406 Myxococcota 2818505 Bacteria Bacteria 50.1 1.95e-4   NR MCA9671053.1 2026763 g9199 i0 34.9 2.75526315789474 86 46 60 2 152 379 65 150 MCA9671053.1 hypothetical protein [Myxococcales bacterium] diamond 1047 50.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32855801 32855801 PRJNA352610_P_NODE_23100_length_262_cov_1.148148_g23039_i0 PRJNA352610 23100 262 1.148148 3.00814776 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 65.1 5.16e-10   NR RLB46302.1 2026735 g23039 i0 53 4.05343511450382 66 31 75.6 0 3 200 271 336 RLB46302.1 MAG: hypothetical protein DRJ42_27970 [Deltaproteobacteria bacterium] diamond 1062 65.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;