contig_metadata
10 rows where bioproject = "PRJNA352610" and tax_phylum = "Ciliophora"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26694826 | 26694826 | PRJNA352610_P_NODE_32001_length_241_cov_0.916667_g31940_i0 | PRJNA352610 | 32001 | 241 | 0.916667 | 2.20916747 | Stylonychia lemnae | 5949 | SAR_Eukaryotes | SAR_Eukaryotes | 64.7 | 6.78e-10 | NR | CDW87295.1 | 5949 | g31940 | i0 | 38.3 | 5.850622406639 | 81 | 48 | 98.3 | 1 | 5 | 241 | 745 | 825 | CDW87295.1 nucleolar rna helicase 2 [Stylonychia lemnae] | diamond | 1410 | 64.7 | 1 | Eukaryota | Sar | Ciliophora | Spirotrichea | Sporadotrichida | Oxytrichidae | Stylonychia | Stylonychia lemnae | ||
| 27201033 | 27201033 | PRJNA352610_P_NODE_8502_length_392_cov_1.097179_g8441_i0 | PRJNA352610 | 8502 | 392 | 1.097179 | 4.30094168 | Tetrahymena malaccensis | 5901 | SAR_Eukaryotes | SAR_Eukaryotes | 70.9 | 1.98e-11 | NR | KAL4462567.1 | 5901 | g8441 | i0 | 39.3 | 7.36224489795918 | 89 | 50 | 65.8 | 2 | 67 | 324 | 122 | 209 | KAL4462567.1 hypothetical protein ABPG74_000397 [Tetrahymena malaccensis] | diamond | 2886 | 70.9 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena malaccensis | ||
| 27327736 | 27327736 | PRJNA352610_P_NODE_19623_length_283_cov_1.276190_g19562_i0 | PRJNA352610 | 19623 | 283 | 1.27619 | 3.6116177 | Blepharisma stoltei | 1481888 | SAR_Eukaryotes | SAR_Eukaryotes | 51.6 | 1.57e-5 | NR | CAG9330569.1 | 1481888 | g19562 | i0 | 63.3 | 0.318021201413428 | 30 | 11 | 31.8 | 0 | 65 | 154 | 4 | 33 | CAG9330569.1 unnamed protein product [Blepharisma stoltei] | diamond | 90 | 51.6 | 1 | Eukaryota | Sar | Ciliophora | Heterotrichea | Heterotrichida | Blepharismidae | Blepharisma | Blepharisma stoltei | ||
| 29632272 | 29632272 | PRJNA352610_P_NODE_4610_length_496_cov_0.903073_g4549_i0 | PRJNA352610 | 4610 | 496 | 0.903073 | 4.47924208 | Stylonychia lemnae | 5949 | SAR_Eukaryotes | SAR_Eukaryotes | 80.1 | 3.94e-14 | NR | CDW83009.1 | 5949 | g4549 | i0 | 33.6 | 0.828629032258065 | 137 | 85 | 80.4 | 4 | 22 | 420 | 204 | 338 | CDW83009.1 fbox domain containing protein [Stylonychia lemnae] | diamond | 411 | 80.1 | 1 | Eukaryota | Sar | Ciliophora | Spirotrichea | Sporadotrichida | Oxytrichidae | Stylonychia | Stylonychia lemnae | ||
| 30011767 | 30011767 | PRJNA352610_P_NODE_6591_length_432_cov_1.047354_g6530_i0 | PRJNA352610 | 6591 | 432 | 1.047354 | 4.52456928 | Blepharisma stoltei | 1481888 | SAR_Eukaryotes | SAR_Eukaryotes | 64.7 | 6.46e-9 | NR | CAG9333893.1 | 1481888 | g6530 | i0 | 39.1 | 0.604166666666667 | 87 | 53 | 60.4 | 0 | 264 | 4 | 718 | 804 | CAG9333893.1 unnamed protein product [Blepharisma stoltei] | diamond | 261 | 64.7 | 1 | Eukaryota | Sar | Ciliophora | Heterotrichea | Heterotrichida | Blepharismidae | Blepharisma | Blepharisma stoltei | ||
| 30770017 | 30770017 | PRJNA352610_P_NODE_25954_length_250_cov_0.870056_g25893_i0 | PRJNA352610 | 25954 | 250 | 0.870056 | 2.17514 | Tetrahymena malaccensis | 5901 | SAR_Eukaryotes | SAR_Eukaryotes | 47.8 | 6.89e-4 | NR | KAL4468966.1 | 5901 | g25893 | i0 | 32.5 | 1.86 | 77 | 47 | 91.2 | 2 | 241 | 14 | 278 | 350 | KAL4468966.1 hypothetical protein ABPG73_019734 [Tetrahymena malaccensis] | diamond | 465 | 47.8 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena malaccensis | ||
| 31165909 | 31165909 | PRJNA352610_P_NODE_995_length_864_cov_3.194690_g951_i0 | PRJNA352610 | 995 | 864 | 3.19469 | 27.6021216 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 70.5 | 2.12e-9 | NR | KAL4454048.1 | 5901 | g951 | i0 | 26.6 | 4.59722222222222 | 301 | 172 | 92.4 | 14 | 806 | 9 | 2157 | 2443 | KAL4454048.1 hypothetical protein ABPG73_009847 [Tetrahymena malaccensis] | diamond | 3972 | 70.5 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena malaccensis | ||
| 31433556 | 31433556 | PRJNA352610_P_NODE_30836_length_242_cov_1.366864_g30775_i0 | PRJNA352610 | 30836 | 242 | 1.366864 | 3.30781088 | Pseudocohnilembus persalinus | 266149 | SAR_Eukaryotes | SAR_Eukaryotes | 73.2 | 4.46e-14 | NR | KRW98677.1 | 266149 | g30775 | i0 | 41.8 | 0.979338842975207 | 79 | 42 | 93 | 1 | 242 | 18 | 73 | 151 | KRW98677.1 Endonuclease/exonuclease/phosphatase [Pseudocohnilembus persalinus] | diamond | 237 | 73.2 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Philasterida | Pseudocohnilembidae | Pseudocohnilembus | Pseudocohnilembus persalinus | ||
| 32841419 | 32841419 | PRJNA352610_P_NODE_20480_length_278_cov_0.995122_g20419_i0 | PRJNA352610 | 20480 | 278 | 0.995122 | 2.76643916 | root | 1 | Root_unresolved | Root_unresolved | 62.4 | 6.5e-9 | NR | CAG9318571.1 | 1481888 | g20419 | i0 | 50 | 2.75179856115108 | 62 | 24 | 59.4 | 2 | 166 | 2 | 146 | 207 | CAG9318571.1 unnamed protein product [Blepharisma stoltei] | diamond | 765 | 62.4 | 1 | Eukaryota | Sar | Ciliophora | Heterotrichea | Heterotrichida | Blepharismidae | Blepharisma | Blepharisma stoltei | ||
| 32887226 | 32887226 | PRJNA352610_P_NODE_27860_length_247_cov_0.885057_g27799_i0 | PRJNA352610 | 27860 | 247 | 0.885057 | 2.18609079 | Moneuplotes crassus | 5936 | SAR_Eukaryotes | SAR_Eukaryotes | 95.9 | 1.9900000000000003e-21 | NR | CAI2375377.1 | 5936 | g27799 | i0 | 63.5 | 0.898785425101215 | 74 | 27 | 89.9 | 0 | 224 | 3 | 106 | 179 | CAI2375377.1 unnamed protein product [Moneuplotes crassus] | diamond | 222 | 95.9 | 1 | Eukaryota | Sar | Ciliophora | Spirotrichea | Euplotida | Euplotidae | Moneuplotes | Moneuplotes crassus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;