contig_metadata
5 rows where bioproject = "PRJNA352610" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27106220 | 27106220 | PRJNA352610_P_NODE_21122_length_274_cov_1.069652_g21061_i0 | PRJNA352610 | 21122 | 274 | 1.069652 | 2.93084648 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 55.1 | 2.25e-6 | NR | MBC62650.1 | 2026715 | g21061 | i0 | 45.3 | 0.58029197080292 | 53 | 29 | 58 | 0 | 274 | 116 | 273 | 325 | MBC62650.1 malate dehydrogenase [Pseudobdellovibrionaceae bacterium] | diamond | 159 | 55.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 28432859 | 28432859 | PRJNA352610_P_NODE_23346_length_260_cov_1.614973_g23285_i0 | PRJNA352610 | 23346 | 260 | 1.614973 | 4.1989298 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 45.1 | 0.00685 | NR | MDQ3231995.1 | 2026715 | g23285 | i0 | 38.4 | 0.992307692307692 | 86 | 41 | 99.2 | 2 | 2 | 259 | 9 | 82 | MDQ3231995.1 response regulator [Pseudobdellovibrionaceae bacterium] | diamond | 258 | 45.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 30376734 | 30376734 | PRJNA352610_P_NODE_8432_length_393_cov_0.962500_g8371_i0 | PRJNA352610 | 8432 | 393 | 0.9625 | 3.782625 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 63.5 | 1.06e-8 | NR | MBQ48580.1 | 2026715 | g8371 | i0 | 31.4 | 3.15267175572519 | 140 | 77 | 96.9 | 4 | 383 | 3 | 23 | 156 | MBQ48580.1 hypothetical protein [Pseudobdellovibrionaceae bacterium] | diamond | 1239 | 63.9 | 0.993740219092332 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 30580068 | 30580068 | PRJNA352610_P_NODE_30373_length_243_cov_0.905882_g30312_i0 | PRJNA352610 | 30373 | 243 | 0.905882 | 2.20129326 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 44.7 | 0.00254 | NR | MEE2744353.1 | 3034175 | g30312 | i0 | 36.4 | 0.679012345679012 | 55 | 34 | 66.7 | 1 | 6 | 167 | 72 | 126 | MEE2744353.1 hypothetical protein [Bdellovibrionota bacterium] | diamond | 165 | 44.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 31844700 | 31844700 | PRJNA352610_P_NODE_15957_length_309_cov_0.978814_g15896_i0 | PRJNA352610 | 15957 | 309 | 0.978814 | 3.02453526 | Silvanigrella paludirubra | 2499159 | Bacteria | Bacteria | 71.6 | 5.77e-12 | NR | WP_153420773.1 | 2499159 | g15896 | i0 | 48.5 | 0.660194174757282 | 68 | 35 | 66 | 0 | 103 | 306 | 57 | 124 | WP_153420773.1 insecticidal delta-endotoxin Cry8Ea1 family protein [Silvanigrella paludirubra] | diamond | 204 | 71.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Silvanigrella | Silvanigrella paludirubra |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;