contig_metadata
57 rows where bioproject = "PRJNA352610" and tax_phylum = "Actinomycetota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 393653 | 393653 | PRJNA352610_P_NODE_12521_length_339_cov_0.770677_g12460_i0 | PRJNA352610 | 12521 | 339 | 0.770677 | 2.61259503 | Corynebacterium sp. YSMAA1_1_F7 | 3383590 | Bacteria | Bacteria | 564 | 3.33e-156 | NTclustered | gi|2869833946|gb|CP175789.1| | 3383590 | g12460 | i0 | 96.755 | 343.6401179941 | 339 | 9 | 100 | 2 | 1 | 339 | 796219 | 795883 | Corynebacterium sp. YSMAA1_1_F7 chromosome, complete genome | blastn | 116494 | 564 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium sp. YSMAA1_1_F7 | ||
| 393865 | 393865 | PRJNA352610_P_NODE_23521_length_259_cov_1.467742_g23460_i0 | PRJNA352610 | 23521 | 259 | 1.467742 | 3.80145178 | Streptomyces poriferorum | 2798799 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|2562642067|gb|CP120990.1| | 2798799 | g23460 | i0 | 96.97 | 0.563706563706564 | 33 | 1 | 13 | 0 | 61 | 93 | 4933402 | 4933370 | Streptomyces poriferorum strain Alt1 chromosome, complete genome | blastn | 146 | 56.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces poriferorum | ||
| 2345891 | 2345891 | PRJNA352610_P_NODE_62_length_1962_cov_3.499735_g58_i0 | PRJNA352610 | 62 | 1962 | 3.499735 | 68.6648007 | Cutibacterium | 1912216 | Bacteria | Bacteria | 3613 | 0 | NTclustered | gi|2548746222|gb|CP129004.1| | 1747 | g58 | i0 | 99.898 | 281.995922528033 | 1962 | 2 | 100 | 0 | 1 | 1962 | 606992 | 608953 | Cutibacterium acnes strain EASDk81B chromosome, complete genome | blastn | 553276 | 3613 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 3621174 | 3621174 | PRJNA352610_P_NODE_25063_length_251_cov_0.865169_g25002_i0 | PRJNA352610 | 25063 | 251 | 0.865169 | 2.17157419 | Cutibacterium | 1912216 | Bacteria | Bacteria | 464 | 2.47e-126 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g25002 | i0 | 100 | 53.00796812749 | 251 | 0 | 100 | 0 | 1 | 251 | 159969 | 160219 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 13305 | 464 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 4220917 | 4220917 | PRJNA352610_P_NODE_15364_length_314_cov_0.834025_g15303_i0 | PRJNA352610 | 15364 | 314 | 0.834025 | 2.6188385 | Corynebacterium accolens | 38284 | Bacteria | Bacteria | 484 | 2.4399999999999998e-132 | NTclustered | gi|2242616707|gb|CP046605.1| | 38284 | g15303 | i0 | 98.195 | 284.200636942675 | 277 | 5 | 88 | 0 | 1 | 277 | 2012554 | 2012830 | Corynebacterium accolens strain DSM 44278 chromosome, complete genome | blastn | 89239 | 484 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium accolens | ||
| 6173413 | 6173413 | PRJNA352610_P_NODE_26005_length_250_cov_0.870056_g25944_i0 | PRJNA352610 | 26005 | 250 | 0.870056 | 2.17514 | Cutibacterium | 1912216 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|966542502|gb|CP012354.1| | 1747 | g25944 | i0 | 100 | 51 | 250 | 0 | 100 | 0 | 1 | 250 | 2262517 | 2262268 | Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome | blastn | 12750 | 462 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 7448392 | 7448392 | PRJNA352610_P_NODE_18566_length_290_cov_0.834101_g18505_i0 | PRJNA352610 | 18566 | 290 | 0.834101 | 2.4188929 | Bacillati | 1783272 | Bacteria | Bacteria | 525 | 1.32e-144 | NTclustered | gi|1678593041|gb|CP035103.1| | 1275 | g18505 | i0 | 99.31 | 109.575862068966 | 290 | 2 | 100 | 0 | 1 | 290 | 2504874 | 2504585 | Kocuria rosea strain ATCC 186 chromosome, complete genome | blastn | 31777 | 525 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Kocuria | Kocuria rosea | ||
| 7448421 | 7448421 | PRJNA352610_P_NODE_29046_length_245_cov_0.895349_g28985_i0 | PRJNA352610 | 29046 | 245 | 0.895349 | 2.19360505 | Cutibacterium | 1912216 | Bacteria | Bacteria | 448 | 2.41e-121 | NTclustered | gi|2548746222|gb|CP129004.1| | 1747 | g28985 | i0 | 99.592 | 52.1428571428571 | 245 | 1 | 100 | 0 | 1 | 245 | 2110036 | 2110280 | Cutibacterium acnes strain EASDk81B chromosome, complete genome | blastn | 12775 | 448 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 8723080 | 8723080 | PRJNA352610_P_NODE_29807_length_244_cov_0.900585_g29746_i0 | PRJNA352610 | 29807 | 244 | 0.900585 | 2.1974274 | Cutibacterium | 1912216 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|966542502|gb|CP012354.1| | 1747 | g29746 | i0 | 100 | 51 | 244 | 0 | 100 | 0 | 1 | 244 | 1347673 | 1347430 | Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome | blastn | 12444 | 451 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 9321977 | 9321977 | PRJNA352610_P_NODE_30028_length_244_cov_0.900585_g29967_i0 | PRJNA352610 | 30028 | 244 | 0.900585 | 2.1974274 | Streptomyces sp. NBC_01546 | 2975872 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2656295666|gb|CP109379.1| | 2975872 | g29967 | i0 | 100 | 0.114754098360656 | 28 | 0 | 11 | 0 | 191 | 218 | 4028124 | 4028097 | Streptomyces sp. NBC_01546 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NBC_01546 | ||
| 9998653 | 9998653 | PRJNA352610_P_NODE_10808_length_358_cov_1.350877_g10747_i0 | PRJNA352610 | 10808 | 358 | 1.350877 | 4.83613966 | root | 1 | Root_unresolved | Root_unresolved | 56.5 | 0.003 | NTclustered | gi|2657114941|gb|CP108188.1| | 68286 | g10747 | i0 | 100 | 19.108938547486 | 30 | 0 | 8 | 0 | 236 | 265 | 2576336 | 2576365 | Streptomyces zaomyceticus strain NBC_00123 chromosome, complete genome | blastn | 6841 | 56.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces zaomyceticus | ||
| 11273715 | 11273715 | PRJNA352610_P_NODE_20089_length_280_cov_1.487923_g20028_i0 | PRJNA352610 | 20089 | 280 | 1.487923 | 4.1661844 | Cutibacterium | 1912216 | Bacteria | Bacteria | 518 | 2.12e-142 | NTclustered | gi|2548746222|gb|CP129004.1| | 1747 | g20028 | i0 | 100 | 51 | 280 | 0 | 100 | 0 | 1 | 280 | 1057627 | 1057906 | Cutibacterium acnes strain EASDk81B chromosome, complete genome | blastn | 14280 | 518 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 11273751 | 11273751 | PRJNA352610_P_NODE_31469_length_241_cov_1.827381_g31408_i0 | PRJNA352610 | 31469 | 241 | 1.827381 | 4.40398821 | Cutibacterium | 1912216 | Bacteria | Bacteria | 446 | 8.519999999999999e-121 | NTclustered | gi|966542502|gb|CP012354.1| | 1747 | g31408 | i0 | 100 | 55.9336099585062 | 241 | 0 | 100 | 0 | 1 | 241 | 2231754 | 2231514 | Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome | blastn | 13480 | 446 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 11872347 | 11872347 | PRJNA352610_P_NODE_1830_length_698_cov_1.376000_g1773_i0 | PRJNA352610 | 1830 | 698 | 1.376 | 9.60448 | Streptomyces clavuligerus | 1901 | Bacteria | Bacteria | 67.6 | 2.49e-6 | NTclustered | gi|1939990771|gb|CP065242.1| | 1901 | g1773 | i0 | 91.667 | 7.72349570200573 | 48 | 4 | 7 | 0 | 358 | 405 | 18608 | 18655 | Streptomyces clavuligerus strain F1D35 plasmid pF1D35A, complete sequence | blastn | 5391 | 67.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces clavuligerus | ||
| 12549010 | 12549010 | PRJNA352610_P_NODE_15870_length_310_cov_0.789030_g15809_i0 | PRJNA352610 | 15870 | 310 | 0.78903 | 2.445993 | Micrococcus | 1269 | Bacteria | Bacteria | 553 | 6.509999999999998e-153 | NTclustered | gi|1891023613|gb|CP058971.1| | 1270 | g15809 | i0 | 99.029 | 247.070967741935 | 309 | 2 | 99 | 1 | 3 | 310 | 346376 | 346068 | Micrococcus luteus strain V017 chromosome, complete genome | blastn | 76592 | 553 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 15098311 | 15098311 | PRJNA352610_P_NODE_22732_length_264_cov_1.167539_g22671_i0 | PRJNA352610 | 22732 | 264 | 1.167539 | 3.08230296 | Hamadaea sp. | 2024425 | Bacteria | Bacteria | 90.5 | 7.56e-19 | NR | WP_290863459.1 | 2024425 | g22671 | i0 | 53.5 | 4.44318181818182 | 86 | 38 | 96.6 | 2 | 259 | 5 | 128 | 212 | WP_290863459.1 MFS transporter [Hamadaea sp.] | diamond | 1173 | 90.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Hamadaea | Hamadaea sp. | ||
| 15696506 | 15696506 | PRJNA352610_P_NODE_25733_length_250_cov_0.870056_g25672_i0 | PRJNA352610 | 25733 | 250 | 0.870056 | 2.17514 | Cutibacterium acnes | 1747 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|2415255273|gb|CP114143.1| | 1734925 | g25672 | i0 | 100 | 51 | 250 | 0 | 100 | 0 | 1 | 250 | 2211686 | 2211437 | Cutibacterium acnes subsp. acnes strain CCSM0331 chromosome, complete genome | blastn | 12750 | 462 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 17648126 | 17648126 | PRJNA352610_P_NODE_14534_length_320_cov_1.085020_g14473_i0 | PRJNA352610 | 14534 | 320 | 1.08502 | 3.472064 | Corynebacterium | 1716 | Bacteria | Bacteria | 580 | 3.099999999999999e-161 | NTclustered | gi|2869817591|gb|CP175775.1| | 1979527 | g14473 | i0 | 99.375 | 361.75625 | 320 | 2 | 100 | 0 | 1 | 320 | 1898 | 1579 | Corynebacterium kefirresidentii strain YSMAA3_1_H1 chromosome, complete genome | blastn | 115762 | 580 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium kefirresidentii | ||
| 17648164 | 17648164 | PRJNA352610_P_NODE_30174_length_243_cov_1.588235_g30113_i0 | PRJNA352610 | 30174 | 243 | 1.588235 | 3.85941105 | Cutibacterium | 1912216 | Bacteria | Bacteria | 444 | 3.09e-120 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g30113 | i0 | 99.588 | 51.6255144032922 | 243 | 1 | 100 | 0 | 1 | 243 | 1631594 | 1631836 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 12545 | 444 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 18921993 | 18921993 | PRJNA352610_P_NODE_29375_length_245_cov_0.895349_g29314_i0 | PRJNA352610 | 29375 | 245 | 0.895349 | 2.19360505 | Cutibacterium | 1912216 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g29314 | i0 | 100 | 52.9428571428571 | 245 | 0 | 100 | 0 | 1 | 245 | 782775 | 782531 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 12971 | 453 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 19519724 | 19519724 | PRJNA352610_P_NODE_28056_length_247_cov_0.885057_g27995_i0 | PRJNA352610 | 28056 | 247 | 0.885057 | 2.18609079 | Cutibacterium acnes | 1747 | Bacteria | Bacteria | 457 | 4.05e-124 | NTclustered | gi|2415255273|gb|CP114143.1| | 1734925 | g27995 | i0 | 100 | 51 | 247 | 0 | 100 | 0 | 1 | 247 | 56767 | 56521 | Cutibacterium acnes subsp. acnes strain CCSM0331 chromosome, complete genome | blastn | 12597 | 457 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 20196593 | 20196593 | PRJNA352610_P_NODE_26636_length_249_cov_0.875000_g26575_i0 | PRJNA352610 | 26636 | 249 | 0.875 | 2.17875 | Cutibacterium | 1912216 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g26575 | i0 | 100 | 18.9839357429719 | 249 | 0 | 100 | 0 | 1 | 249 | 2259291 | 2259539 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 4727 | 460 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 20795278 | 20795278 | PRJNA352610_P_NODE_25117_length_251_cov_0.865169_g25056_i0 | PRJNA352610 | 25117 | 251 | 0.865169 | 2.17157419 | Cutibacterium acnes | 1747 | Bacteria | Bacteria | 448 | 2.48e-121 | NTclustered | gi|2415255273|gb|CP114143.1| | 1734925 | g25056 | i0 | 98.805 | 62.6653386454183 | 251 | 3 | 100 | 0 | 1 | 251 | 962299 | 962549 | Cutibacterium acnes subsp. acnes strain CCSM0331 chromosome, complete genome | blastn | 15729 | 448 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 22747436 | 22747436 | PRJNA352610_P_NODE_18798_length_288_cov_1.334884_g18737_i0 | PRJNA352610 | 18798 | 288 | 1.334884 | 3.84446592 | Cutibacterium | 1912216 | Bacteria | Bacteria | 508 | 1.32e-139 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g18737 | i0 | 98.944 | 50.6979166666667 | 284 | 3 | 99 | 0 | 4 | 287 | 40983 | 40700 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 14601 | 508 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 23345537 | 23345537 | PRJNA352610_P_NODE_13339_length_330_cov_1.513619_g13278_i0 | PRJNA352610 | 13339 | 330 | 1.513619 | 4.9949427 | Corynebacterium gottingense | 2041036 | Bacteria | Bacteria | 508 | 1.53e-139 | NTclustered | gi|2869851930|gb|CP175790.1| | 2041036 | g13278 | i0 | 95.062 | 347.7 | 324 | 14 | 100 | 2 | 1 | 323 | 2001930 | 2002252 | Corynebacterium gottingense strain YSMAA1_1_F6 chromosome, complete genome | blastn | 114741 | 508 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium gottingense | ||
| 23345848 | 23345848 | PRJNA352610_P_NODE_29839_length_244_cov_0.900585_g29778_i0 | PRJNA352610 | 29839 | 244 | 0.900585 | 2.1974274 | Corynebacterium jeddahense | 1414719 | Bacteria | Bacteria | 401 | 1.8999999999999998e-107 | NTclustered | gi|2443262567|gb|CP063194.1| | 1414719 | g29778 | i0 | 96.311 | 475.450819672131 | 244 | 9 | 100 | 0 | 1 | 244 | 917339 | 917096 | Corynebacterium jeddahense strain DSM 45997 chromosome, complete genome | blastn | 116010 | 401 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium jeddahense | ||
| 23345878 | 23345878 | PRJNA352610_P_NODE_31339_length_242_cov_0.911243_g31278_i0 | PRJNA352610 | 31339 | 242 | 0.911243 | 2.20520806 | Cutibacterium avidum | 33010 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|2047661185|dbj|AP024309.1| | 33010 | g31278 | i0 | 100 | 45.7851239669422 | 242 | 0 | 100 | 0 | 1 | 242 | 270940 | 271181 | Cutibacterium avidum TPCV-14 DNA, complete genome | blastn | 11080 | 448 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium avidum | ||
| 24022307 | 24022307 | PRJNA352610_P_NODE_27339_length_248_cov_0.880000_g27278_i0 | PRJNA352610 | 27339 | 248 | 0.88 | 2.1824 | Cutibacterium | 1912216 | Bacteria | Bacteria | 459 | 1.13e-124 | NTclustered | gi|2548746222|gb|CP129004.1| | 1747 | g27278 | i0 | 100 | 53 | 248 | 0 | 100 | 0 | 1 | 248 | 1826065 | 1825818 | Cutibacterium acnes strain EASDk81B chromosome, complete genome | blastn | 13144 | 459 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 24022319 | 24022319 | PRJNA352610_P_NODE_31199_length_242_cov_0.911243_g31138_i0 | PRJNA352610 | 31199 | 242 | 0.911243 | 2.20520806 | Cutibacterium | 1912216 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g31138 | i0 | 100 | 68.896694214876 | 242 | 0 | 100 | 0 | 1 | 242 | 1959313 | 1959072 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 16673 | 448 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 26726190 | 26726190 | PRJNA352610_P_NODE_14821_length_318_cov_0.942857_g14760_i0 | PRJNA352610 | 14821 | 318 | 0.942857 | 2.99828526 | Acidimicrobiaceae bacterium | 2024894 | Bacteria | Bacteria | 101 | 5.02e-24 | NR | MBC83285.1 | 2024894 | g14760 | i0 | 48 | 0.943396226415094 | 100 | 42 | 94.3 | 2 | 315 | 16 | 113 | 202 | MBC83285.1 hypothetical protein [Acidimicrobiaceae bacterium] | diamond | 300 | 101 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Acidimicrobiaceae | Acidimicrobiaceae bacterium | |||
| 26790062 | 26790062 | PRJNA352610_P_NODE_26101_length_250_cov_0.870056_g26040_i0 | PRJNA352610 | 26101 | 250 | 0.870056 | 2.17514 | Eggerthellaceae bacterium | 1972561 | Bacteria | Bacteria | 94 | 1.69e-22 | NR | MCL1797062.1 | 1972561 | g26040 | i0 | 51.8 | 0.996 | 83 | 40 | 99.6 | 0 | 249 | 1 | 12 | 94 | MCL1797062.1 hypothetical protein [Eggerthellaceae bacterium] | diamond | 249 | 94 | 1 | Bacteria | Bacillati | Actinomycetota | Coriobacteriia | Eggerthellales | Eggerthellaceae | Eggerthellaceae bacterium | |||
| 27074772 | 27074772 | PRJNA352610_P_NODE_27502_length_248_cov_0.880000_g27441_i0 | PRJNA352610 | 27502 | 248 | 0.88 | 2.1824 | Yinghuangia seranimata | 408067 | Bacteria | Bacteria | 45.4 | 0.00432 | NR | WP_281470510.1 | 408067 | g27441 | i0 | 40 | 1.86290322580645 | 60 | 35 | 72.6 | 1 | 247 | 68 | 127 | 185 | WP_281470510.1 ankyrin repeat domain-containing protein [Yinghuangia seranimata] | diamond | 462 | 45.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Yinghuangia | Yinghuangia seranimata | ||
| 27264505 | 27264505 | PRJNA352610_P_NODE_14683_length_319_cov_1.089431_g14622_i0 | PRJNA352610 | 14683 | 319 | 1.089431 | 3.47528489 | Geodermatophilus normandii | 1137989 | Bacteria | Bacteria | 78.2 | 1.52e-14 | NR | WP_204264519.1 | 1137989 | g14622 | i0 | 42.7 | 0.90282131661442 | 96 | 55 | 90.3 | 0 | 317 | 30 | 162 | 257 | WP_204264519.1 TauD/TfdA family dioxygenase [Geodermatophilus normandii] | diamond | 288 | 78.2 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Geodermatophilales | Geodermatophilaceae | Geodermatophilus | Geodermatophilus normandii | ||
| 27296033 | 27296033 | PRJNA352610_P_NODE_12863_length_335_cov_1.175573_g12802_i0 | PRJNA352610 | 12863 | 335 | 1.175573 | 3.93816955 | Mycobacteriaceae bacterium | 2448780 | Bacteria | Bacteria | 106 | 1.84e-25 | NR | NBP86788.1 | 2448780 | g12802 | i0 | 46.8 | 2.98208955223881 | 111 | 59 | 99.4 | 0 | 334 | 2 | 127 | 237 | NBP86788.1 class I SAM-dependent methyltransferase [Mycobacteriaceae bacterium] | diamond | 999 | 106 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacteriaceae bacterium | |||
| 27611981 | 27611981 | PRJNA352610_P_NODE_19364_length_285_cov_0.801887_g19303_i0 | PRJNA352610 | 19364 | 285 | 0.801887 | 2.28537795 | Gaiellales bacterium | 2093372 | Bacteria | Bacteria | 46.2 | 0.00351 | NR | MDX6533954.1 | 2093372 | g19303 | i0 | 38.7 | 0.789473684210526 | 75 | 39 | 73.7 | 3 | 3 | 212 | 96 | 168 | MDX6533954.1 hypothetical protein [Gaiellales bacterium] | diamond | 225 | 46.2 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Gaiellales | Gaiellales bacterium | ||||
| 28211581 | 28211581 | PRJNA352610_P_NODE_29406_length_245_cov_0.895349_g29345_i0 | PRJNA352610 | 29406 | 245 | 0.895349 | 2.19360505 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 65.1 | 6.49e-11 | NR | HEX8100744.1 | 2900548 | g29345 | i0 | 38.5 | 5.82857142857143 | 78 | 48 | 95.5 | 0 | 11 | 244 | 43 | 120 | HEX8100744.1 endonuclease VII domain-containing protein [Actinomycetota bacterium] | diamond | 1428 | 65.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium | ||||||
| 28211591 | 28211591 | PRJNA352610_P_NODE_6906_length_425_cov_1.269886_g6845_i0 | PRJNA352610 | 6906 | 425 | 1.269886 | 5.3970155 | Actinoplanes regularis | 52697 | Bacteria | Bacteria | 124 | 4.749999999999999e-31 | NR | WP_089293525.1 | 52697 | g6845 | i0 | 52.3 | 1.86352941176471 | 132 | 52 | 93.2 | 2 | 425 | 30 | 31 | 151 | WP_089293525.1 aldose epimerase family protein [Actinoplanes regularis] | diamond | 792 | 124 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Actinoplanes | Actinoplanes regularis | ||
| 28306542 | 28306542 | PRJNA352610_P_NODE_9126_length_382_cov_0.996764_g9065_i0 | PRJNA352610 | 9126 | 382 | 0.996764 | 3.80763848 | Streptomyces | 1883 | Bacteria | Bacteria | 88.2 | 1.62e-17 | NR | WP_051720655.1 | 1883 | g9065 | i0 | 53.5 | 2.70157068062827 | 86 | 39 | 67.5 | 1 | 113 | 370 | 80 | 164 | WP_051720655.1 MULTISPECIES: ATP-grasp domain-containing protein [Streptomyces] | diamond | 1032 | 88.2 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | |||
| 28338133 | 28338133 | PRJNA352610_P_NODE_28886_length_246_cov_0.838150_g28825_i0 | PRJNA352610 | 28886 | 246 | 0.83815 | 2.061849 | Streptacidiphilus monticola | 2161674 | Bacteria | Bacteria | 43.5 | 0.0199 | NR | MFD0330360.1 | 2161674 | g28825 | i0 | 46.3 | 0.817073170731707 | 67 | 29 | 79.3 | 3 | 48 | 242 | 101 | 162 | MFD0330360.1 carbohydrate-binding protein [Streptacidiphilus monticola] | diamond | 201 | 43.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptacidiphilus | Streptacidiphilus monticola | ||
| 28513108 | 28513108 | PRJNA352610_P_NODE_31347_length_242_cov_0.911243_g31286_i0 | PRJNA352610 | 31347 | 242 | 0.911243 | 2.20520806 | Bacteria | 2 | Bacteria | Bacteria | 56.6 | 3.86e-7 | NR | WP_155848813.1 | 208444 | g31286 | i0 | 51.9 | 1.22727272727273 | 54 | 26 | 66.9 | 0 | 1 | 162 | 80 | 133 | WP_155848813.1 hypothetical protein [Amycolatopsis vancoresmycina] | diamond | 297 | 57 | 0.992982456140351 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Amycolatopsis | Amycolatopsis vancoresmycina | ||
| 29127641 | 29127641 | PRJNA352610_P_NODE_129_length_1601_cov_3.007853_g120_i0 | PRJNA352610 | 129 | 1601 | 3.007853 | 48.15572653 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 50.4 | 0.0182 | NR | MEC7001195.1 | 2900548 | g120 | i0 | 30.9 | 0.260462211118051 | 139 | 74 | 22.9 | 6 | 1444 | 1079 | 274 | 407 | MEC7001195.1 hypothetical protein [Actinomycetota bacterium] | diamond | 417 | 50.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium | ||||||
| 29222327 | 29222327 | PRJNA352610_P_NODE_19329_length_285_cov_1.075472_g19268_i0 | PRJNA352610 | 19329 | 285 | 1.075472 | 3.0650952 | Pilimelia sp. | 2605714 | Bacteria | Bacteria | 55.8 | 6.33e-7 | NR | HWH00255.1 | 2605714 | g19268 | i0 | 42.5 | 0.768421052631579 | 73 | 41 | 75.8 | 1 | 60 | 275 | 83 | 155 | HWH00255.1 alpha-ketoglutarate-dependent dioxygenase AlkB [Pilimelia sp.] | diamond | 219 | 55.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Pilimelia | Pilimelia sp. | ||
| 29365685 | 29365685 | PRJNA352610_P_NODE_17409_length_297_cov_1.651786_g17348_i0 | PRJNA352610 | 17409 | 297 | 1.651786 | 4.90580442 | Bacteria | 2 | Bacteria | Bacteria | 110 | 1.13e-26 | NR | WP_226352717.1 | 2846759 | g17348 | i0 | 53.7 | 7.61616161616162 | 95 | 42 | 96 | 1 | 3 | 287 | 163 | 255 | WP_226352717.1 NADP-dependent oxidoreductase [Pseudonocardia sp. ICBG601] | diamond | 2262 | 110 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Pseudonocardia | Pseudonocardia sp. ICBG601 | ||
| 29474445 | 29474445 | PRJNA352610_P_NODE_11230_length_353_cov_0.957143_g11169_i0 | PRJNA352610 | 11230 | 353 | 0.957143 | 3.37871479 | Demequina sp. | 2050685 | Bacteria | Bacteria | 79.3 | 9.28e-15 | NR | MCR6712026.1 | 2050685 | g11169 | i0 | 65.5 | 0.46742209631728 | 55 | 19 | 46.7 | 0 | 352 | 188 | 267 | 321 | MCR6712026.1 hypothetical protein [Demequina sp.] | diamond | 165 | 79.3 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Demequinaceae | Demequina | Demequina sp. | ||
| 29727065 | 29727065 | PRJNA352610_P_NODE_24290_length_255_cov_1.225275_g24229_i0 | PRJNA352610 | 24290 | 255 | 1.225275 | 3.12445125 | Acidimicrobiales bacterium | 2201156 | Bacteria | Bacteria | 62.8 | 2.77e-9 | NR | HVM55672.1 | 2201156 | g24229 | i0 | 44.8 | 1.02352941176471 | 87 | 37 | 98.8 | 5 | 255 | 4 | 133 | 211 | HVM55672.1 nucleoside hydrolase [Acidimicrobiales bacterium] | diamond | 261 | 62.8 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Acidimicrobiales bacterium | ||||
| 30454174 | 30454174 | PRJNA352610_P_NODE_18073_length_293_cov_1.050000_g18012_i0 | PRJNA352610 | 18073 | 293 | 1.05 | 3.0765 | Kitasatospora sp. NPDC | 1871188 | Bacteria | Bacteria | 66.6 | 2.77e-10 | NR | WP_350772165.1 | 3154519 | g18012 | i0 | 38.2 | 2.49829351535836 | 89 | 55 | 91.1 | 0 | 273 | 7 | 675 | 763 | WP_350772165.1 amino acid adenylation domain-containing protein [Kitasatospora sp. NPDC001527] | diamond | 732 | 66.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Kitasatospora | Kitasatospora sp. NPDC001527 | ||
| 30548660 | 30548660 | PRJNA352610_P_NODE_12833_length_335_cov_1.557252_g12772_i0 | PRJNA352610 | 12833 | 335 | 1.557252 | 5.2167942 | Streptomyces eurythermus | 42237 | Bacteria | Bacteria | 55.5 | 3.44e-6 | NR | WP_381562017.1 | 42237 | g12772 | i0 | 32.7 | 1.8089552238806 | 101 | 66 | 90.4 | 1 | 33 | 335 | 131 | 229 | WP_381562017.1 cytochrome P450 family protein [Streptomyces eurythermus] | diamond | 606 | 55.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces eurythermus | ||
| 30580060 | 30580060 | PRJNA352610_P_NODE_20633_length_277_cov_1.102941_g20572_i0 | PRJNA352610 | 20633 | 277 | 1.102941 | 3.05514657 | Streptomyces gibsoniae | 3075529 | Bacteria | Bacteria | 44.7 | 0.0121 | NR | WP_311698039.1 | 3075529 | g20572 | i0 | 36.9 | 0.703971119133574 | 65 | 40 | 69.3 | 1 | 19 | 210 | 369 | 433 | WP_311698039.1 Pls/PosA family non-ribosomal peptide synthetase [Streptomyces gibsoniae] | diamond | 195 | 44.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces gibsoniae | ||
| 30643342 | 30643342 | PRJNA352610_P_NODE_26153_length_250_cov_0.864407_g26092_i0 | PRJNA352610 | 26153 | 250 | 0.864407 | 2.1610175 | Cellulomonas sp. | 40001 | Bacteria | Bacteria | 43.1 | 0.0298 | NR | HEY0119421.1 | 40001 | g26092 | i0 | 35.4 | 0.78 | 65 | 39 | 74.4 | 1 | 198 | 13 | 371 | 435 | HEY0119421.1 DUF222 domain-containing protein [Cellulomonas sp.] | diamond | 195 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Cellulomonadaceae | Cellulomonas | Cellulomonas sp. | ||
| 30896422 | 30896422 | PRJNA352610_P_NODE_21254_length_273_cov_1.155000_g21193_i0 | PRJNA352610 | 21254 | 273 | 1.155 | 3.15315 | Streptomyces sp. SID1 | 2690252 | Bacteria | Bacteria | 53.1 | 1.14e-5 | NR | WP_164262650.1 | 2706028 | g21193 | i0 | 50 | 1.26373626373626 | 70 | 31 | 73.6 | 3 | 73 | 273 | 43 | 111 | WP_164262650.1 ATP-grasp domain-containing protein [Streptomyces sp. SID10853] | diamond | 345 | 53.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. SID10853 | ||
| 31148580 | 31148580 | PRJNA352610_P_NODE_13435_length_329_cov_1.964844_g13374_i0 | PRJNA352610 | 13435 | 329 | 1.964844 | 6.46433676 | Microlunatus panaciterrae | 400768 | Bacteria | Bacteria | 58.9 | 7.06e-8 | NR | WP_204916798.1 | 400768 | g13374 | i0 | 51.7 | 1.06686930091185 | 58 | 26 | 52.9 | 1 | 77 | 250 | 134 | 189 | WP_204916798.1 SOUL family heme-binding protein [Microlunatus panaciterrae] | diamond | 351 | 58.9 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Microlunatus | Microlunatus panaciterrae | ||
| 31148612 | 31148612 | PRJNA352610_P_NODE_4775_length_489_cov_1.447115_g4714_i0 | PRJNA352610 | 4775 | 489 | 1.447115 | 7.07639235 | Nocardia puris | 208602 | Bacteria | Bacteria | 79 | 9.58e-14 | NR | WP_195124445.1 | 208602 | g4714 | i0 | 51.9 | 2.01226993865031 | 79 | 36 | 48.5 | 1 | 2 | 238 | 86 | 162 | WP_195124445.1 cation:proton antiporter [Nocardia puris] | diamond | 984 | 79 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Nocardia | Nocardia puris | ||
| 31482720 | 31482720 | PRJNA352610_P_NODE_28016_length_247_cov_0.885057_g27955_i0 | PRJNA352610 | 28016 | 247 | 0.885057 | 2.18609079 | FCB group | 1783270 | Bacteria | Bacteria | 75.9 | 8.4e-14 | NR | HXY91285.1 | 2080302 | g27955 | i0 | 62.1 | 3.41295546558704 | 58 | 20 | 70.4 | 1 | 237 | 64 | 486 | 541 | HXY91285.1 AMP-binding protein [Acidimicrobiia bacterium] | diamond | 843 | 76.6 | 0.990861618798956 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiia bacterium | |||||
| 31876311 | 31876311 | PRJNA352610_P_NODE_11157_length_354_cov_0.964413_g11096_i0 | PRJNA352610 | 11157 | 354 | 0.964413 | 3.41402202 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 52 | 5.48e-5 | NR | MBX3284814.1 | 2900548 | g11096 | i0 | 35 | 1.72881355932203 | 103 | 59 | 83.1 | 4 | 330 | 37 | 35 | 134 | MBX3284814.1 ankyrin repeat domain-containing protein [Actinomycetota bacterium] | diamond | 612 | 52 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium | ||||||
| 32161415 | 32161415 | PRJNA352610_P_NODE_26358_length_249_cov_0.875000_g26297_i0 | PRJNA352610 | 26358 | 249 | 0.875 | 2.17875 | Leucobacter ruminantium | 1289170 | Bacteria | Bacteria | 121 | 3.6499999999999997e-31 | NR | WP_208044399.1 | 1289170 | g26297 | i0 | 79 | 0.975903614457831 | 81 | 12 | 91.6 | 1 | 2 | 229 | 9 | 89 | WP_208044399.1 ABC transporter substrate-binding protein [Leucobacter ruminantium] | diamond | 243 | 121 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Leucobacter | Leucobacter ruminantium | ||
| 32635232 | 32635232 | PRJNA352610_P_NODE_19540_length_284_cov_0.862559_g19479_i0 | PRJNA352610 | 19540 | 284 | 0.862559 | 2.44966756 | Microthrixaceae bacterium | 2497627 | Bacteria | Bacteria | 44.3 | 0.0157 | NR | MFV0315796.1 | 2497627 | g19479 | i0 | 44 | 0.528169014084507 | 50 | 25 | 49.6 | 1 | 20 | 160 | 201 | 250 | MFV0315796.1 GDSL-type esterase/lipase family protein [Microthrixaceae bacterium] | diamond | 150 | 44.3 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Microthrixaceae | Microthrixaceae bacterium | |||
| 32761421 | 32761421 | PRJNA352610_P_NODE_24880_length_251_cov_1.674157_g24819_i0 | PRJNA352610 | 24880 | 251 | 1.674157 | 4.20213407 | Thermoleophilaceae bacterium | 2732252 | Bacteria | Bacteria | 56.6 | 2.23e-7 | NR | MFL5865810.1 | 2732252 | g24819 | i0 | 41.4 | 2.00796812749004 | 87 | 35 | 98 | 4 | 247 | 2 | 78 | 153 | MFL5865810.1 class I SAM-dependent methyltransferase [Thermoleophilaceae bacterium] | diamond | 504 | 56.6 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Thermoleophilales | Thermoleophilaceae | Thermoleophilaceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;