RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA352610", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA352610 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27422677 27422677 PRJNA352610_P_NODE_30683_length_243_cov_0.905882_g30622_i0 PRJNA352610 30683 243 0.905882 2.20129326 Coemansia umbellata 1424467 Fungi Fungi 44.3 0.0104   NR KAJ1993395.1 1424467 g30622 i0 36.4 1.75308641975309 66 41 81.5 1 12 209 258 322 KAJ1993395.1 hypothetical protein EDC05_002259 [Coemansia umbellata] diamond 426 44.3 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia umbellata
31292598 31292598 PRJNA352610_P_NODE_24095_length_256_cov_1.256831_g24034_i0 PRJNA352610 24095 256 1.256831 3.21748736 Fungi 4751 Fungi Fungi 43.9 0.0168   NR KAK9764072.1 34480 g24034 i0 43.2 2.671875 44 25 51.6 0 181 50 380 423 KAK9764072.1 hypothetical protein K7432_008750 [Basidiobolus ranarum] diamond 684 44.3 0.99097065462754 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum
31939594 31939594 PRJNA352610_P_NODE_13077_length_333_cov_1.076923_g13016_i0 PRJNA352610 13077 333 1.076923 3.58615359 Basidiobolus meristosporus CBS 931.73 1314790 Fungi Fungi 105 4.7e-24   NR ORX91482.1 1314790 g13016 i0 53.1 0.882882882882883 98 46 88.3 0 39 332 40 137 ORX91482.1 hypothetical protein K493DRAFT_286769 [Basidiobolus meristosporus CBS 931.73] diamond 294 105 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus meristosporus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;