RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA352610", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 5 ✖

tax_kingdom 1

  • Bacillati · 5 ✖

bioproject 1

  • PRJNA352610 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26662965 26662965 PRJNA352610_P_NODE_22481_length_265_cov_1.604167_g22420_i0 PRJNA352610 22481 265 1.604167 4.25104255 Armatimonadota bacterium 2033014 Bacteria Bacteria 103 4.68e-24   NR MEI7985897.1 2033014 g22420 i0 59.8 0.984905660377358 87 34 98.5 1 5 265 138 223 MEI7985897.1 glycoside hydrolase family 5 protein [Armatimonadota bacterium] diamond 261 103 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27422682 27422682 PRJNA352610_P_NODE_32103_length_241_cov_0.863095_g32042_i0 PRJNA352610 32103 241 0.863095 2.08005895 Armatimonadota bacterium 2033014 Bacteria Bacteria 74.3 6.62e-14   NR GDX40226.1 2033014 g32042 i0 52.6 1.61825726141079 76 33 92.1 2 228 7 159 233 GDX40226.1 hypothetical protein LBMAG21_05180 [Armatimonadota bacterium] diamond 390 74.3 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28369591 28369591 PRJNA352610_P_NODE_3046_length_577_cov_1.990079_g2985_i0 PRJNA352610 3046 577 1.990079 11.48275583 Armatimonadota bacterium 2033014 Bacteria Bacteria 125 4.65e-32   NR GDX40226.1 2033014 g2985 i0 48.9 0.733102253032929 141 67 71.8 4 2 415 96 234 GDX40226.1 hypothetical protein LBMAG21_05180 [Armatimonadota bacterium] diamond 423 125 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28401248 28401248 PRJNA352610_P_NODE_9806_length_372_cov_0.832776_g9745_i0 PRJNA352610 9806 372 0.832776 3.09792672 Capsulimonas sp. 2494211 Bacteria Bacteria 91.7 1.07e-18   NR MCW3061757.1 2494211 g9745 i0 49.5 2.20161290322581 91 39 73.4 3 96 368 384 467 MCW3061757.1 putative glycosyl hydrolase [Capsulimonas sp.] diamond 819 91.7 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas sp.
31387740 31387740 PRJNA352610_P_NODE_236_length_1376_cov_1.535687_g223_i0 PRJNA352610 236 1376 1.535687 21.13105312 PVC group 1783257 Bacteria Bacteria 359 2.3499999999999998e-112   NR HET6386082.1 2033014 g223 i0 46.2 2.71656976744186 411 207 88.1 5 1348 137 40 443 HET6386082.1 pectinesterase family protein [Armatimonadota bacterium] diamond 3738 359 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;