RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

18 rows where bioproject = "PRJNA352610", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 18 ✖

tax_clade 1

  • Sar · 18 ✖

bioproject 1

  • PRJNA352610 · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4220993 4220993 PRJNA352610_P_NODE_18524_length_290_cov_1.050691_g18463_i0 PRJNA352610 18524 290 1.050691 3.0470039 Dinophyceae 2864 SAR_Eukaryotes SAR_Eukaryotes 152 1.3899999999999996e-42   NR KAF4662583.1 330153 g18463 i0 72.9 7.9448275862069 96 26 99.3 0 3 290 117 212 KAF4662583.1 hypothetical protein FOL47_006179 [Perkinsus chesapeaki] diamond 2304 152 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
8047316 8047316 PRJNA352610_P_NODE_5607_length_459_cov_1.095855_g5546_i0 PRJNA352610 5607 459 1.095855 5.02997445 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 228 1.13e-73   NR KAF4700315.1 32597 g5546 i0 73 21.843137254902 152 41 99.3 0 2 457 14 165 KAF4700315.1 Arf GTPase arf1 [Perkinsus olseni] diamond 10026 228 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
13147411 13147411 PRJNA352610_P_NODE_19591_length_283_cov_1.466667_g19530_i0 PRJNA352610 19591 283 1.466667 4.15066761 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 94 3.43e-20   NR KAF4657297.1 32597 g19530 i0 67.5 0.848056537102474 80 26 84.8 0 4 243 315 394 KAF4657297.1 U4 u6 small nuclear ribonucleoprotein [Perkinsus olseni] diamond 240 94 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
13147790 13147790 PRJNA352610_P_NODE_9471_length_376_cov_2.702970_g9410_i0 PRJNA352610 9471 376 2.70297 10.1631672 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 159 2.0499999999999998e-34   NTclustered gi|294881230|ref|XM_002769261.1| 423536 g9410 i0 78.244 16.2021276595745 262 48 68 7 9 265 306 49 Perkinsus marinus ATCC 50983 60S ribosomal protein L27a, putative, mRNA blastn 6092 159 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
26965367 26965367 PRJNA352610_P_NODE_27422_length_248_cov_0.880000_g27361_i0 PRJNA352610 27422 248 0.88 2.1824 root 1 Root_unresolved Root_unresolved 53.5 1.27e-6   NR KAF4722627.1 32597 g27361 i0 40.3 4.68145161290323 77 46 93.1 0 248 18 49 125 KAF4722627.1 hypothetical protein FOZ63_029349, partial [Perkinsus olseni] diamond 1161 53.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
27232807 27232807 PRJNA352610_P_NODE_23023_length_262_cov_1.481481_g22962_i0 PRJNA352610 23023 262 1.481481 3.88148022 Perkinsus chesapeaki 330153 SAR_Eukaryotes SAR_Eukaryotes 77.8 2.11e-14   NR KAF4675656.1 330153 g22962 i0 50.7 0.767175572519084 67 33 76.7 0 255 55 127 193 KAF4675656.1 hypothetical protein FOL47_007428 [Perkinsus chesapeaki] diamond 201 77.8 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
28085408 28085408 PRJNA352610_P_NODE_5765_length_454_cov_1.461942_g5704_i0 PRJNA352610 5765 454 1.461942 6.63721668 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.0236   NR XP_002774905.1 423536 g5704 i0 38.3 0.753303964757709 60 37 39.6 0 172 351 259 318 XP_002774905.1 hypothetical protein Pmar_PMAR007438 [Perkinsus marinus ATCC 50983] diamond 342 45.8 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
28811375 28811375 PRJNA352610_P_NODE_32028_length_241_cov_0.916667_g31967_i0 PRJNA352610 32028 241 0.916667 2.20916747 Perkinsus chesapeaki 330153 SAR_Eukaryotes SAR_Eukaryotes 48.9 2.53e-4   NR KAF4664286.1 330153 g31967 i0 47.1 0.634854771784232 51 25 61 1 94 240 688 738 KAF4664286.1 hypothetical protein FOL47_005217 [Perkinsus chesapeaki] diamond 153 48.9 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
29474464 29474464 PRJNA352610_P_NODE_27830_length_247_cov_0.885057_g27769_i0 PRJNA352610 27830 247 0.885057 2.18609079 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 51.2 4.13e-5   NR KAF4659573.1 32597 g27769 i0 34.9 5.35627530364372 63 39 74.1 2 246 64 1087 1149 KAF4659573.1 hypothetical protein FOZ61_004654 [Perkinsus olseni] diamond 1323 51.2 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
30643318 30643318 PRJNA352610_P_NODE_11213_length_353_cov_1.096429_g11152_i0 PRJNA352610 11213 353 1.096429 3.87039437 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.0149   NR KAF4690192.1 32597 g11152 i0 46.2 0.662889518413598 39 21 33.1 0 349 233 1023 1061 KAF4690192.1 hypothetical protein FOZ60_000546 [Perkinsus olseni] diamond 234 45.4 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
30896403 30896403 PRJNA352610_P_NODE_12294_length_341_cov_1.029851_g12233_i0 PRJNA352610 12294 341 1.029851 3.51179191 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 167 8.349999999999999e-47   NR KAF4655531.1 32597 g12233 i0 64 4.83870967741935 111 40 97.7 0 7 339 206 316 KAF4655531.1 hypothetical protein FOZ61_007528 [Perkinsus olseni] diamond 1650 167 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
31117150 31117150 PRJNA352610_P_NODE_11035_length_355_cov_1.453901_g10974_i0 PRJNA352610 11035 355 1.453901 5.16134855 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 49.3 6.67e-4   NR KAF4754063.1 32597 g10974 i0 40.7 1.58028169014084 54 29 45.6 1 117 278 228 278 KAF4754063.1 hypothetical protein FOZ62_024433, partial [Perkinsus olseni] diamond 561 49.3 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
31148620 31148620 PRJNA352610_P_NODE_9615_length_374_cov_1.564784_g9554_i0 PRJNA352610 9615 374 1.564784 5.85229216 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 62.8 1.42e-8   NR KAF4736437.1 32597 g9554 i0 33.1 0.970588235294118 121 70 91.4 5 13 354 195 311 KAF4736437.1 hypothetical protein FOZ62_016183, partial [Perkinsus olseni] diamond 363 62.8 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
31939618 31939618 PRJNA352610_P_NODE_26597_length_249_cov_0.875000_g26536_i0 PRJNA352610 26597 249 0.875 2.17875 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.00336   NR KAF4751301.1 32597 g26536 i0 44.7 1.69879518072289 47 26 56.6 0 222 82 37 83 KAF4751301.1 hypothetical protein FOZ62_008849, partial [Perkinsus olseni] diamond 423 44.3 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
31956813 31956813 PRJNA352610_P_NODE_16417_length_305_cov_1.318966_g16356_i0 PRJNA352610 16417 305 1.318966 4.0228463 Perkinsozoa 2497438 SAR_Eukaryotes SAR_Eukaryotes 117 2.899999999999999e-29   NR KAF4749837.1 32597 g16356 i0 56.1 10.3868852459016 98 40 93.4 1 290 6 120 217 KAF4749837.1 hypothetical protein FOZ63_007177, partial [Perkinsus olseni] diamond 3168 118 0.991525423728814 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
32034692 32034692 PRJNA352610_P_NODE_3118_length_572_cov_1.132265_g3057_i0 PRJNA352610 3118 572 1.132265 6.4765558 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 234 2.62e-75   NR KAF4700315.1 32597 g3057 i0 75.5 11.0402097902098 151 36 79.2 1 3 455 32 181 KAF4700315.1 Arf GTPase arf1 [Perkinsus olseni] diamond 6315 234 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
32319785 32319785 PRJNA352610_P_NODE_24959_length_251_cov_1.235955_g24898_i0 PRJNA352610 24959 251 1.235955 3.10224705 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 48.5 7.66e-5   NR KAF4741144.1 32597 g24898 i0 82.6 0.274900398406374 23 4 27.5 0 4 72 16 38 KAF4741144.1 hypothetical protein FOZ62_006983, partial [Perkinsus olseni] diamond 69 48.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
32635228 32635228 PRJNA352610_P_NODE_18520_length_290_cov_1.059908_g18459_i0 PRJNA352610 18520 290 1.059908 3.0737332 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 156 4.469999999999999e-42   NR KAF4675070.1 32597 g18459 i0 72.9 6.95172413793103 96 26 99.3 0 290 3 608 703 KAF4675070.1 hypothetical protein FOL46_002986 [Perkinsus olseni] diamond 2016 156 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;