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contig_metadata

13 rows where bioproject = "PRJNA352610", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 13 ✖

tax_clade 1

  • Sar · 13 ✖

bioproject 1

  • PRJNA352610 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4221331 4221331 PRJNA352610_P_NODE_5564_length_460_cov_1.149871_g5503_i0 PRJNA352610 5564 460 1.149871 5.2894066 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.045   NTclustered gi|921126845|ref|XM_013582578.1| 51315 g5503 i0 100 0.0608695652173913 28 0 6 0 332 359 524 497 Eimeria necatrix hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
5497659 5497659 PRJNA352610_P_NODE_31725_length_241_cov_0.916667_g31664_i0 PRJNA352610 31725 241 0.916667 2.20916747 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.3e-4   NTclustered gi|820693004|tpe|LN714485.1| 572307 g31664 i0 100 0.265560165975104 32 0 13 0 188 219 2580288 2580319 TPA_asm: Neospora caninum Liverpool, chromosome chrX, complete genome blastn 64 60.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
8046871 8046871 PRJNA352610_P_NODE_12167_length_342_cov_1.234201_g12106_i0 PRJNA352610 12167 342 1.234201 4.22096742 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 131 6.97e-33   NR XP_013337376.1 5804 g12106 i0 57.4 10.3421052631579 108 46 94.7 0 1 324 497 604 XP_013337376.1 CAM kinase, CDPK family, putative [Eimeria maxima] diamond 3537 131 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
23345907 23345907 PRJNA352610_P_NODE_3899_length_528_cov_1.714286_g3838_i0 PRJNA352610 3899 528 1.714286 9.05143008 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 187 1.84e-57   NR UKK01874.1 68886 g3838 i0 68.5 9.36363636363636 149 44 83 2 42 479 1 149 UKK01874.1 calmodulin [Theileria orientalis] diamond 4944 188 0.99468085106383 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis
26853492 26853492 PRJNA352610_P_NODE_15501_length_313_cov_0.925000_g15440_i0 PRJNA352610 15501 313 0.925 2.89525 Babesia sp. Xinjiang 462227 SAR_Eukaryotes SAR_Eukaryotes 76.6 1.05e-13   NR XP_028870119.1 462227 g15440 i0 39.6 1.72523961661342 106 54 92 2 288 1 121 226 XP_028870119.1 Mitogen-activated protein kinase 7 [Babesia sp. Xinjiang] diamond 540 76.6 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia sp. Xinjiang
27534352 27534352 PRJNA352610_P_NODE_20343_length_279_cov_0.912621_g20282_i0 PRJNA352610 20343 279 0.912621 2.54621259 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 117 3.5999999999999996e-31   NR 2RHD_A 5807 g20282 i0 56.2 54.6236559139785 89 39 95.7 0 1 267 37 125 2RHD_A Chain A, Small GTP binding protein rab1a [Cryptosporidium parvum] diamond 15240 118 0.991525423728814 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
27913003 27913003 PRJNA352610_P_NODE_25465_length_251_cov_0.865169_g25404_i0 PRJNA352610 25465 251 0.865169 2.17157419 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 102 3.569999999999999e-23   NR XP_026192387.1 88456 g25404 i0 55.1 16.1593625498008 78 34 93.2 1 17 250 234 310 XP_026192387.1 importin subunit alpha-1a [Cyclospora cayetanensis] diamond 4056 103 0.990291262135922 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
29050003 29050003 PRJNA352610_P_NODE_7288_length_416_cov_1.513120_g7227_i0 PRJNA352610 7288 416 1.51312 6.2945792 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 78.6 4.03e-14   NR KAF7455983.1 83540 g7227 i0 37.3 6.38942307692308 110 69 79.3 0 411 82 196 305 KAF7455983.1 TBC domain-containing protein [Cryptosporidium felis] diamond 2658 78.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium felis
29695395 29695395 PRJNA352610_P_NODE_20690_length_276_cov_1.517241_g20629_i0 PRJNA352610 20690 276 1.517241 4.18758516 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.0382   NR OEH78494.1 88456 g20629 i0 55.6 0.978260869565217 45 16 45.7 2 269 144 293 336 OEH78494.1 microneme protein [Cyclospora cayetanensis] diamond 270 43.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
30106277 30106277 PRJNA352610_P_NODE_15332_length_314_cov_0.958506_g15271_i0 PRJNA352610 15332 314 0.958506 3.00970884 Cryptosporidium muris RN66 441375 SAR_Eukaryotes SAR_Eukaryotes 49.7 3.25e-4   NR XP_002140872.1 441375 g15271 i0 35.6 2.42675159235669 87 47 81.2 3 59 313 1302 1381 XP_002140872.1 endonuclease/exonuclease/phosphatase family protein [Cryptosporidium muris RN66] diamond 762 49.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium muris
31387745 31387745 PRJNA352610_P_NODE_696_length_978_cov_1.667403_g663_i0 PRJNA352610 696 978 1.667403 16.30720134 Eimeriidae 5799 SAR_Eukaryotes SAR_Eukaryotes 61.6 2.55e-6   NR XP_013249226.1 5801 g663 i0 54.5 0.806748466257669 44 20 13.5 0 22 153 533 576 XP_013249226.1 hypothetical protein, conserved [Eimeria acervulina] diamond 789 61.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
31528612 31528612 PRJNA352610_P_NODE_12896_length_335_cov_1.000000_g12835_i0 PRJNA352610 12896 335 1 3.35 Sarcocystis calchasi 1344799 SAR_Eukaryotes SAR_Eukaryotes 59.7 1.27e-7   NR CAL7858378.1 1344799 g12835 i0 52.3 0.394029850746269 44 21 39.4 0 203 334 895 938 CAL7858378.1 unnamed protein product [Sarcocystis calchasi] diamond 132 59.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
32604024 32604024 PRJNA352610_P_NODE_30120_length_244_cov_0.859649_g30059_i0 PRJNA352610 30120 244 0.859649 2.09754356 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 56.6 4.99e-7   NR XP_029215613.1 94643 g30059 i0 43.3 0.737704918032787 60 33 73.8 1 7 186 623 681 XP_029215613.1 EGF family domain-containing protein [Besnoitia besnoiti] diamond 180 56.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;