RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA352610", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA352610 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30281950 30281950 PRJNA352610_P_NODE_11412_length_351_cov_0.971223_g11351_i0 PRJNA352610 11412 351 0.971223 3.40899273 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 46.2 0.00791   NR KAG9392364.1 201153 g11351 i0 33.7 3.12820512820513 86 55 73.5 1 83 340 939 1022 KAG9392364.1 Protein kinase domain [Carpediemonas membranifera] diamond 1098 46.6 0.991416309012876 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
31767040 31767040 PRJNA352610_P_NODE_25837_length_250_cov_0.870056_g25776_i0 PRJNA352610 25837 250 0.870056 2.17514 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 53.1 9.19e-6   NR KAG9396803.1 201153 g25776 i0 41.3 7.2 63 35 73.2 1 249 67 3259 3321 KAG9396803.1 Dynein heavy chain and region D6 of dynein motor [Carpediemonas membranifera] diamond 1800 53.1 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;