RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA352610", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA352610 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27074744 27074744 PRJNA352610_P_NODE_12622_length_337_cov_2.113636_g12561_i0 PRJNA352610 12622 337 2.113636 7.12295332 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 42.4 0.033   NR HEY7554829.1 2838779 g12561 i0 36.2 0.614243323442137 69 35 53.4 1 314 135 8 76 HEY7554829.1 DUF5658 family protein [Candidatus Binatia bacterium] diamond 207 42.4 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31465527 31465527 PRJNA352610_P_NODE_29256_length_245_cov_0.895349_g29195_i0 PRJNA352610 29256 245 0.895349 2.19360505 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 59.3 5.1e-8   NR HZR80116.1 2838779 g29195 i0 41.5 1.00408163265306 82 45 99.2 2 3 245 194 273 HZR80116.1 hypothetical protein [Candidatus Binatia bacterium] diamond 246 59.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32368493 32368493 PRJNA352610_P_NODE_21719_length_270_cov_1.172589_g21658_i0 PRJNA352610 21719 270 1.172589 3.1659903 Pseudomonadati 3379134 Bacteria Bacteria 73.6 7.47e-13   NR HXN20557.1 2811406 g21658 i0 48.3 2.92222222222222 87 42 96.7 1 1 261 176 259 HXN20557.1 cation:proton antiporter [Candidatus Binatus sp.] diamond 789 74.3 0.990578734858681 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae Candidatus Binatus Candidatus Binatus sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;