RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA348537", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA348537 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9321504 9321504 PRJNA348537_S_NODE_3768_length_163_cov_1.664062_g3722_i0 PRJNA348537 3768 163 1.664062 2.71242106 Aggregatilineales bacterium 2952883 Bacteria Bacteria 86.1 1.34e-12   NTclustered gi|2621706248|emb|OY764157.1| 2952883 g3722 i0 79.104 78.159509202454 134 20 80 6 34 163 143812 143941 MAG: Aggregatilineales bacterium isolate e8f4d38d-de70-4490-8638-1b8803f995b9 genome assembly, chromosome: 1 blastn 12740 86.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae Aggregatilineales     Aggregatilineales bacterium
14422237 14422237 PRJNA348537_S_NODE_2992_length_179_cov_2.770833_g2946_i0 PRJNA348537 2992 179 2.770833 4.95979107 Caldilineaceae bacterium 2614250 Bacteria Bacteria 211 2.36e-50   NTclustered gi|2893356069|emb|OZ220492.1| 2614250 g2946 i0 88.136 45.3016759776536 177 21 99 0 2 178 2777658 2777834 MAG: Caldilineaceae bacterium isolate e886e3b1-96bd-41d4-96ed-8e2f365de7fb genome assembly, chromosome: 1 blastn 8109 211 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;