RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA348537", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA348537 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18245081 18245081 PRJNA348537_S_NODE_3915_length_160_cov_3.584000_g3869_i0 PRJNA348537 3915 160 3.584 5.7344 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 291 2.5799999999999998e-74   NTclustered gi|681870004|gb|KM001687.1| 1542451 g3869 i0 99.375 5 160 1 100 0 1 160 1407 1248 Myxidium streisingeri clone ZF12 18S small subunit ribosomal RNA gene, partial sequence blastn 800 291 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri
24619658 24619658 PRJNA348537_S_NODE_1280_length_256_cov_69.823529_g1234_i0 PRJNA348537 1280 256 69.823529 178.74823424 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 263 9.88e-66   NTclustered gi|681870004|gb|KM001687.1| 1542451 g1234 i0 95.21 51.1875 167 6 64 2 92 256 1061 895 Myxidium streisingeri clone ZF12 18S small subunit ribosomal RNA gene, partial sequence blastn 13104 263 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;