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contig_metadata

10 rows where bioproject = "PRJNA345071" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 10 ✖

bioproject 1

  • PRJNA345071 · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6771093 6771093 PRJNA345071_P_NODE_9266_length_247_cov_0.896552_g9226_i0 PRJNA345071 9266 247 0.896552 2.21448344 archaeon 1906665 Archaea Archaea 131 8.36e-38   NR RYY86203.1 1906665 g9226 i0 85.7 0.935222672064777 77 11 93.5 0 16 246 2 78 RYY86203.1 MAG: hypothetical protein EON63_06120 [archaeon] diamond 231 131 1 Archaea               archaeon
9321438 9321438 PRJNA345071_P_NODE_8148_length_251_cov_0.876404_g8108_i0 PRJNA345071 8148 251 0.876404 2.19977404 Haloplanus sp. GX21 3127120 Archaea Archaea 52.8 0.023   NTclustered gi|2700851762|gb|CP147874.1| 3127120 g8108 i0 100 0.111553784860558 28 0 11 0 161 188 177848 177821 Haloplanus sp. GX21 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloplanus Haloplanus sp. GX21
13147012 13147012 PRJNA345071_P_NODE_5991_length_274_cov_1.497512_g5951_i0 PRJNA345071 5991 274 1.497512 4.10318288 root 1 Root_unresolved Root_unresolved 124 1.4099999999999998e-31   NR OLS15498.1 1849166 g5951 i0 68.5 4.02919708029197 92 28 99.6 1 273 1 200 291 OLS15498.1 MAG: protein AtoB1 [Promethearchaeota archaeon CR_4] diamond 1104 125 0.992 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon CR_4
16970830 16970830 PRJNA345071_P_NODE_9234_length_247_cov_0.896552_g9194_i0 PRJNA345071 9234 247 0.896552 2.21448344 archaeon 1906665 Archaea Archaea 100 1.1200000000000001e-22   NR RYY33227.1 1906665 g9194 i0 61.8 0.923076923076923 76 29 92.3 0 18 245 54 129 RYY33227.1 MAG: hypothetical protein EON62_04445, partial [archaeon] diamond 228 100 1 Archaea               archaeon
28179953 28179953 PRJNA345071_P_NODE_7866_length_252_cov_0.871508_g7826_i0 PRJNA345071 7866 252 0.871508 2.19620016 archaeon 1906665 Archaea Archaea 99.4 1.5099999999999998e-23   NR RYG42784.1 1906665 g7826 i0 60.5 9.51190476190476 81 31 95.2 1 250 11 41 121 RYG42784.1 MAG: catalase, partial [archaeon] diamond 2397 99.4 1 Archaea               archaeon
28274793 28274793 PRJNA345071_P_NODE_4626_length_297_cov_1.392857_g4586_i0 PRJNA345071 4626 297 1.392857 4.13678529 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 46.2 0.00346   NR HLN33892.1 2169593 g4586 i0 27.4 0.848484848484849 84 61 84.8 0 18 269 42 125 HLN33892.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 252 46.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
30106264 30106264 PRJNA345071_P_NODE_9292_length_247_cov_0.896552_g9252_i0 PRJNA345071 9292 247 0.896552 2.21448344 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 42.7 0.0393   NR MCL6579572.1 2026714 g9252 i0 27.6 0.923076923076923 76 55 92.3 0 230 3 867 942 MCL6579572.1 DUF3883 domain-containing protein [Candidatus Bathyarchaeota archaeon] diamond 228 42.7 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
30896393 30896393 PRJNA345071_P_NODE_10154_length_244_cov_0.912281_g10114_i0 PRJNA345071 10154 244 0.912281 2.22596564 Methanobrevibacter sp. 66852 Archaea Archaea 51.2 3.85e-5   NR MBR3139444.1 66852 g10114 i0 37.8 3.31967213114754 82 45 97.1 3 2 238 283 361 MBR3139444.1 LicD family protein [Methanobrevibacter sp.] diamond 810 51.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31211752 31211752 PRJNA345071_P_NODE_11135_length_232_cov_2.597484_g11095_i0 PRJNA345071 11135 232 2.597484 6.02616288 Marine Group I thaumarchaeote 2511932 Archaea Archaea 51.6 2.41e-5   NR NWJ99825.1 2511932 g11095 i0 57.6 0.426724137931034 33 14 42.7 0 216 118 28 60 NWJ99825.1 hypothetical protein [Marine Group I thaumarchaeote] diamond 99 51.6 1 Archaea Marine Group I Thermoproteati Nitrososphaerota         Marine Group I thaumarchaeote
32351232 32351232 PRJNA345071_P_NODE_5199_length_287_cov_1.457944_g5159_i0 PRJNA345071 5199 287 1.457944 4.18429928 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 46.2 0.00355   NR NOJ30365.1 2169593 g5159 i0 67.6 0.355400696864112 34 10 34.5 1 22 120 1 34 NOJ30365.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 102 46.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;