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contig_metadata

14 rows where bioproject = "PRJNA345071" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA345071 · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2943930 2943930 PRJNA345071_P_NODE_11303_length_227_cov_2.084416_g11263_i0 PRJNA345071 11303 227 2.084416 4.73162432 Caenorhabditis remanei 31234 Nematoda Nematoda 78.7 3.34e-10   NTclustered gi|2445352248|ref|XM_053723719.1| 31234 g11263 i0 89.231 0.850220264317181 65 4 28 3 155 217 282 219 Caenorhabditis remanei uncharacterized protein (GCK72_002963), partial mRNA blastn 193 78.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis remanei
4220544 4220544 PRJNA345071_P_NODE_1464_length_455_cov_3.510471_g1424_i0 PRJNA345071 1464 455 3.510471 15.97264305 Metazoa 33208 Nematoda Nematoda 98.6 5.759999999999999e-23   NR VDK78877.1 42156 g1424 i0 78.5 6.41538461538462 65 14 42.9 0 453 259 88 152 VDK78877.1 unnamed protein product [Litomosoides sigmodontis] diamond 2919 98.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Litomosoides Litomosoides sigmodontis
11871978 11871978 PRJNA345071_P_NODE_4270_length_305_cov_2.689655_g4230_i0 PRJNA345071 4270 305 2.689655 8.20344775 Angiostrongylus cantonensis 6313 Nematoda Nematoda 119 6.14e-29   NR KAE9418459.1 6313 g4230 i0 64.6 10.0131147540984 96 33 94.4 1 16 303 187 281 KAE9418459.1 hypothetical protein Angca_009785 [Angiostrongylus cantonensis] diamond 3054 119 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Angiostrongylus Angiostrongylus cantonensis
15098209 15098209 PRJNA345071_P_NODE_9812_length_245_cov_0.906977_g9772_i0 PRJNA345071 9812 245 0.906977 2.22209365 Onchocercidae 6296 Nematoda Nematoda 136 1.09e-39   NR CDQ08417.1 6279 g9772 i0 75.3 18.8448979591837 81 20 99.2 0 245 3 1 81 CDQ08417.1 Bm12763, partial [Brugia malayi] diamond 4617 137 0.992700729927007 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Brugia Brugia malayi
22747298 22747298 PRJNA345071_P_NODE_2138_length_389_cov_2.060127_g2098_i0 PRJNA345071 2138 389 2.060127 8.01389403 Dracunculus medinensis 318479 Nematoda Nematoda 206 1.48e-65   NR VDN59360.1 318479 g2098 i0 83.2 9.57840616966581 125 21 96.4 0 14 388 18 142 VDN59360.1 unnamed protein product [Dracunculus medinensis] diamond 3726 206 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Dracunculidae Dracunculus Dracunculus medinensis
24619603 24619603 PRJNA345071_P_NODE_7720_length_253_cov_0.866667_g7680_i0 PRJNA345071 7720 253 0.866667 2.19266751 Dirofilaria immitis 6287 Nematoda Nematoda 80.5 1.05e-10   NTclustered gi|1774710611|gb|MK820661.1| 6287 g7680 i0 90.164 1.8102766798419 61 6 24 0 183 243 92 32 Dirofilaria immitis nuclear hormone receptor DAF-12a mRNA, complete cds blastn 458 80.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Dirofilaria Dirofilaria immitis
27043151 27043151 PRJNA345071_P_NODE_10742_length_242_cov_0.923077_g10702_i0 PRJNA345071 10742 242 0.923077 2.23384634 Bursaphelenchus xylophilus 6326 Nematoda Nematoda 64.3 9.08e-10   NR CAD5234749.1 6326 g10702 i0 46.9 4.47520661157025 49 26 60.7 0 188 42 368 416 CAD5234749.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 1083 64.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
27502909 27502909 PRJNA345071_P_NODE_10623_length_242_cov_1.810651_g10583_i0 PRJNA345071 10623 242 1.810651 4.38177542 Steinernema 34507 Nematoda Nematoda 129 9.62e-33   NR TMS36883.1 34508 g10583 i0 81.3 22.797520661157 80 15 99.2 0 2 241 409 488 TMS36883.1 hypothetical protein L596_003949 [Steinernema carpocapsae] diamond 5517 129 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
29807546 29807546 PRJNA345071_P_NODE_3731_length_321_cov_1.217742_g3691_i0 PRJNA345071 3731 321 1.217742 3.90895182 Metazoa 33208 Nematoda Nematoda 113 6.09e-29   NR CDJ81780.1 6289 g3691 i0 64.3 9.25233644859813 84 30 78.5 0 57 308 1 84 CDJ81780.1 Glutathione S-transferase domain containing protein [Haemonchus contortus] diamond 2970 113 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
31623345 31623345 PRJNA345071_P_NODE_9916_length_245_cov_0.906977_g9876_i0 PRJNA345071 9916 245 0.906977 2.22209365 Wuchereria bancrofti 6293 Nematoda Nematoda 50.4 7.33e-5   NR VDM20661.1 6293 g9876 i0 36.3 0.979591836734694 80 49 98 1 4 243 68 145 VDM20661.1 unnamed protein product [Wuchereria bancrofti] diamond 240 50.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Wuchereria Wuchereria bancrofti
31798521 31798521 PRJNA345071_P_NODE_7737_length_253_cov_0.866667_g7697_i0 PRJNA345071 7737 253 0.866667 2.19266751 Metazoa 33208 Nematoda Nematoda 59.3 6.01e-8   NR CAL2031754.1 135651 g7697 i0 48 5.47826086956522 50 25 59.3 1 99 248 16 64 CAL2031754.1 unnamed protein product [Caenorhabditis brenneri] diamond 1386 59.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis brenneri
31988477 31988477 PRJNA345071_P_NODE_5818_length_277_cov_1.397059_g5778_i0 PRJNA345071 5818 277 1.397059 3.86985343 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 78.6 1.41e-14   NR KHN85536.1 6265 g5778 i0 63.6 4.11552346570397 55 20 59.6 0 167 3 3 57 KHN85536.1 Dynactin subunit 1 [Toxocara canis] diamond 1140 78.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
32210061 32210061 PRJNA345071_P_NODE_5498_length_282_cov_1.492823_g5458_i0 PRJNA345071 5498 282 1.492823 4.20976086 Trichinella 6333 Nematoda Nematoda 128 3.9699999999999996e-32   NR KAL1245750.1 6334 g5458 i0 71.1 1.91489361702128 90 26 95.7 0 3 272 597 686 KAL1245750.1 NAD(P) transhydrogenase [Trichinella spiralis] diamond 540 128 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
32572733 32572733 PRJNA345071_P_NODE_9839_length_245_cov_0.906977_g9799_i0 PRJNA345071 9839 245 0.906977 2.22209365 Aphelenchoides avenae 70226 Nematoda Nematoda 110 4.12e-26   NR KAH7724663.1 70226 g9799 i0 65.9 1.00408163265306 82 27 99.2 1 3 245 321 402 KAH7724663.1 splicing factor 3B subunit 1 [Aphelenchoides avenae] diamond 246 110 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;