RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA345071" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA345071 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5497048 5497048 PRJNA345071_P_NODE_7365_length_255_cov_2.120879_g7325_i0 PRJNA345071 7365 255 2.120879 5.40824145 Trichovirus chloropersicae 3432984 Viruses Viruses 388 1.5499999999999998e-103   NTclustered gi|1479557639|gb|MH084696.1| 2358294 g7325 i0 94.118 20.5647058823529 255 15 100 0 1 255 5664 5918 Peach chlorotic leaf spot virus isolate RP19-2, complete genome blastn 5244 388 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus chloropersicae
15696053 15696053 PRJNA345071_P_NODE_6393_length_268_cov_1.610256_g6353_i0 PRJNA345071 6393 268 1.610256 4.31548608 Trichovirus chloropersicae 3432984 Viruses Viruses 424 4.5099999999999996e-114   NTclustered gi|1479557639|gb|MH084696.1| 2358294 g6353 i0 95.149 46.9850746268657 268 13 100 0 1 268 6966 6699 Peach chlorotic leaf spot virus isolate RP19-2, complete genome blastn 12592 424 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus chloropersicae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;