contig_metadata
5 rows where bioproject = "PRJNA345071" and tax_phylum = "Acidobacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24022181 | 24022181 | PRJNA345071_P_NODE_6079_length_273_cov_1.170000_g6039_i0 | PRJNA345071 | 6079 | 273 | 1.17 | 3.1941 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 93.2 | 2.3e-20 | NR | MEO7650235.1 | 2212468 | g6039 | i0 | 78.3 | 1.32967032967033 | 60 | 13 | 65.9 | 0 | 7 | 186 | 256 | 315 | MEO7650235.1 cysteine synthase A [Bryobacteraceae bacterium] | diamond | 363 | 93.2 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 26631619 | 26631619 | PRJNA345071_P_NODE_1301_length_477_cov_5.650990_g1261_i0 | PRJNA345071 | 1301 | 477 | 5.65099 | 26.9552223 | Candidatus Korobacter sp. | 2510641 | Bacteria | Bacteria | 46.2 | 0.023 | NR | HEY3926946.1 | 2510641 | g1261 | i0 | 33.7 | 0.578616352201258 | 92 | 56 | 54.7 | 2 | 105 | 365 | 307 | 398 | HEY3926946.1 SLBB domain-containing protein [Candidatus Korobacter sp.] | diamond | 276 | 46.2 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Candidatus Korobacteraceae | Candidatus Korobacter | Candidatus Korobacter sp. | ||
| 27502910 | 27502910 | PRJNA345071_P_NODE_4423_length_302_cov_1.362445_g4383_i0 | PRJNA345071 | 4423 | 302 | 1.362445 | 4.1145839 | Bacteria | 2 | Bacteria | Bacteria | 62.8 | 6.53e-9 | NR | MEP7116495.1 | 1978231 | g4383 | i0 | 55.6 | 2.64238410596026 | 45 | 20 | 44.7 | 0 | 166 | 300 | 4 | 48 | MEP7116495.1 pyridoxal-phosphate dependent enzyme [Acidobacteriota bacterium] | diamond | 798 | 62.8 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 32097859 | 32097859 | PRJNA345071_P_NODE_9218_length_247_cov_0.896552_g9178_i0 | PRJNA345071 | 9218 | 247 | 0.896552 | 2.21448344 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 56.2 | 6.88e-7 | NR | HET6977948.1 | 2283092 | g9178 | i0 | 36.8 | 0.923076923076923 | 76 | 48 | 92.3 | 0 | 230 | 3 | 473 | 548 | HET6977948.1 NACHT domain-containing protein [Pyrinomonadaceae bacterium] | diamond | 228 | 56.2 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 32463311 | 32463311 | PRJNA345071_P_NODE_2739_length_356_cov_1.434629_g2699_i0 | PRJNA345071 | 2739 | 356 | 1.434629 | 5.1072792400000004 | Bacteria | 2 | Bacteria | Bacteria | 65.5 | 1.5e-9 | NR | OFW14145.1 | 1797190 | g2699 | i0 | 43.8 | 1.29775280898876 | 80 | 40 | 63.2 | 1 | 3 | 227 | 875 | 954 | OFW14145.1 MAG: hypothetical protein A3F69_06655, partial [Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10] | diamond | 462 | 65.9 | 0.993930197268589 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;