RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA345071" and tax_kingdom = "Thermoproteati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA345071 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28274793 28274793 PRJNA345071_P_NODE_4626_length_297_cov_1.392857_g4586_i0 PRJNA345071 4626 297 1.392857 4.13678529 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 46.2 0.00346   NR HLN33892.1 2169593 g4586 i0 27.4 0.848484848484849 84 61 84.8 0 18 269 42 125 HLN33892.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 252 46.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
30106264 30106264 PRJNA345071_P_NODE_9292_length_247_cov_0.896552_g9252_i0 PRJNA345071 9292 247 0.896552 2.21448344 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 42.7 0.0393   NR MCL6579572.1 2026714 g9252 i0 27.6 0.923076923076923 76 55 92.3 0 230 3 867 942 MCL6579572.1 DUF3883 domain-containing protein [Candidatus Bathyarchaeota archaeon] diamond 228 42.7 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
31211752 31211752 PRJNA345071_P_NODE_11135_length_232_cov_2.597484_g11095_i0 PRJNA345071 11135 232 2.597484 6.02616288 Marine Group I thaumarchaeote 2511932 Archaea Archaea 51.6 2.41e-5   NR NWJ99825.1 2511932 g11095 i0 57.6 0.426724137931034 33 14 42.7 0 216 118 28 60 NWJ99825.1 hypothetical protein [Marine Group I thaumarchaeote] diamond 99 51.6 1 Archaea Marine Group I Thermoproteati Nitrososphaerota         Marine Group I thaumarchaeote
32351232 32351232 PRJNA345071_P_NODE_5199_length_287_cov_1.457944_g5159_i0 PRJNA345071 5199 287 1.457944 4.18429928 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 46.2 0.00355   NR NOJ30365.1 2169593 g5159 i0 67.6 0.355400696864112 34 10 34.5 1 22 120 1 34 NOJ30365.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 102 46.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;