RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA345071", tax_kingdom = "Metazoa" and tax_phylum = "Nemertea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nemertea · 12 ✖

tax_kingdom 1

  • Metazoa · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA345071 · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8046546 8046546 PRJNA345071_P_NODE_1227_length_488_cov_3.342169_g1187_i0 PRJNA345071 1227 488 3.342169 16.30978472 Lineus viridis 56195 Nemertea other_Eukaryota 234 2.15e-75   NR ABZ04260.1 56195 g1187 i0 77.3 2.79098360655738 150 34 92.2 0 452 3 1 150 ABZ04260.1 ribosomal protein rps8 [Lineus viridis] diamond 1362 234 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus viridis
9321296 9321296 PRJNA345071_P_NODE_188_length_1015_cov_2.719745_g164_i0 PRJNA345071 188 1015 2.719745 27.60541175 Lineus longissimus 88925 Nemertea other_Eukaryota 259 3.12e-75   NR XP_064629748.1 88925 g164 i0 49.2 0.697536945812808 236 116 69.5 3 3 707 689 921 XP_064629748.1 deleted in malignant brain tumors 1 protein-like [Lineus longissimus] diamond 708 259 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
11871926 11871926 PRJNA345071_P_NODE_230_length_943_cov_2.109195_g201_i0 PRJNA345071 230 943 2.109195 19.88970885 Lineus longissimus 88925 Nemertea other_Eukaryota 248 2.69e-71   NR XP_064629748.1 88925 g201 i0 50 0.699893955461294 220 106 69.7 3 943 287 705 921 XP_064629748.1 deleted in malignant brain tumors 1 protein-like [Lineus longissimus] diamond 660 248 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
13146942 13146942 PRJNA345071_P_NODE_291_length_856_cov_1.867178_g256_i0 PRJNA345071 291 856 1.867178 15.98304368 Lineus longissimus 88925 Nemertea other_Eukaryota 238 3.48e-68   NR XP_064629748.1 88925 g256 i0 43.4 2.63901869158878 249 136 86.6 3 71 811 676 921 XP_064629748.1 deleted in malignant brain tumors 1 protein-like [Lineus longissimus] diamond 2259 238 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
20794778 20794778 PRJNA345071_P_NODE_5957_length_274_cov_2.601990_g5917_i0 PRJNA345071 5957 274 2.60199 7.1294526 Lineus viridis 56195 Nemertea other_Eukaryota 167 8.609999999999999e-37   NTclustered gi|166952326|gb|EU302557.1| 56195 g5917 i0 79.654 23.6897810218978 231 47 84 0 30 260 18 248 Lineus viridis ribosomal protein rpl37a mRNA, complete cds blastn 6491 167 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus viridis
24619560 24619560 PRJNA345071_P_NODE_5900_length_275_cov_2.138614_g5860_i0 PRJNA345071 5900 275 2.138614 5.8811885 Metazoa 33208 Nemertea other_Eukaryota 117 9.969999999999998e-31   NR ABZ04228.1 56195 g5860 i0 74.6 3.67636363636364 67 17 73.1 0 73 273 1 67 ABZ04228.1 ribosomal protein rpl13a [Lineus viridis] diamond 1011 117 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus viridis
28179949 28179949 PRJNA345071_P_NODE_5406_length_283_cov_2.690476_g5366_i0 PRJNA345071 5406 283 2.690476 7.61404708 Lineus longissimus 88925 Nemertea other_Eukaryota 97.1 5.08e-21   NR XP_064629748.1 88925 g5366 i0 46.2 0.985865724381625 93 48 98.6 1 280 2 756 846 XP_064629748.1 deleted in malignant brain tumors 1 protein-like [Lineus longissimus] diamond 279 97.1 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
28938052 28938052 PRJNA345071_P_NODE_7988_length_252_cov_0.871508_g7948_i0 PRJNA345071 7988 252 0.871508 2.19620016 Lineus longissimus 88925 Nemertea other_Eukaryota 59.3 6.08e-8   NR XP_064623817.1 88925 g7948 i0 51.5 0.80952380952381 68 33 81 0 248 45 1188 1255 XP_064623817.1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4-like isoform X2 [Lineus longissimus] diamond 204 59.3 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
29600723 29600723 PRJNA345071_P_NODE_4470_length_301_cov_1.355263_g4430_i0 PRJNA345071 4470 301 1.355263 4.07934163 Lineus longissimus 88925 Nemertea other_Eukaryota 94.4 5.68e-20   NR XP_064629748.1 88925 g4430 i0 50.6 1.62458471760797 81 34 79.7 2 243 4 675 750 XP_064629748.1 deleted in malignant brain tumors 1 protein-like [Lineus longissimus] diamond 489 94.4 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
29885369 29885369 PRJNA345071_P_NODE_191_length_1007_cov_2.528908_g167_i0 PRJNA345071 191 1007 2.528908 25.46610356 Lineus longissimus 88925 Nemertea other_Eukaryota 233 9.37e-66   NR XP_064629748.1 88925 g167 i0 45.8 0.741807348560079 249 127 72.7 7 943 212 676 921 XP_064629748.1 deleted in malignant brain tumors 1 protein-like [Lineus longissimus] diamond 747 233 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
32097858 32097858 PRJNA345071_P_NODE_8358_length_250_cov_1.322034_g8318_i0 PRJNA345071 8358 250 1.322034 3.305085 Lineus longissimus 88925 Nemertea other_Eukaryota 86.3 8.92e-18   NR XP_064652273.1 88925 g8318 i0 56.3 0.852 71 30 85.2 1 215 3 39 108 XP_064652273.1 cathepsin B-like [Lineus longissimus] diamond 213 86.3 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
32414450 32414450 PRJNA345071_P_NODE_7159_length_258_cov_1.572973_g7119_i0 PRJNA345071 7159 258 1.572973 4.05827034 Lineus longissimus 88925 Nemertea other_Eukaryota 72.4 8.98e-13   NR XP_064638471.1 88925 g7119 i0 39.5 1 86 48 100 1 258 1 199 280 XP_064638471.1 sodium/potassium-transporting ATPase subunit beta-2-like [Lineus longissimus] diamond 258 72.4 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;