RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA345071", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA345071 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28496060 28496060 PRJNA345071_P_NODE_8147_length_251_cov_0.876404_g8107_i0 PRJNA345071 8147 251 0.876404 2.19977404 Rozella allomycis CSF55 988480 Fungi Fungi 44.3 0.00941   NR RKP20052.1 988480 g8107 i0 44.2 1.24302788844622 52 27 59.8 1 102 251 23 74 RKP20052.1 hypothetical protein ROZALSC1DRAFT_8602, partial [Rozella allomycis CSF55] diamond 312 44.3 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
29727029 29727029 PRJNA345071_P_NODE_10130_length_244_cov_0.912281_g10090_i0 PRJNA345071 10130 244 0.912281 2.22596564 Rozella allomycis CSF55 988480 Fungi Fungi 73.6 5.45e-13   NR EPZ31434.1 988480 g10090 i0 46.3 7.86885245901639 80 41 95.9 1 8 241 300 379 EPZ31434.1 Clathrin heavy chain 1 [Rozella allomycis CSF55] diamond 1920 73.6 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;