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contig_metadata

30 rows where bioproject = "PRJNA345071", tax_clade = "core chlorophytes" and tax_phylum = "Chlorophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 30 ✖

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 30 ✖

bioproject 1

  • PRJNA345071 · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
393433 393433 PRJNA345071_P_NODE_5581_length_281_cov_1.418269_g5541_i0 PRJNA345071 5581 281 1.418269 3.98533589 Chlorella variabilis 554065 Plants Plants 211 4.04e-50   NTclustered gi|552811023|ref|XM_005843291.1| 554065 g5541 i0 81.481 70.6761565836299 270 39 95 10 16 281 447 185 Chlorella variabilis S-adenosyl-L-homocysteine hydrolase (CHLNCDRAFT_37522) mRNA, complete cds blastn 19860 211 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
2943902 2943902 PRJNA345071_P_NODE_10023_length_244_cov_4.929825_g9983_i0 PRJNA345071 10023 244 4.929825 12.028773 Chlorella variabilis 554065 Plants Plants 60.2 1.32e-4   NTclustered gi|552840625|ref|XM_005850035.1| 554065 g9983 i0 88.462 0.213114754098361 52 2 21 4 50 101 833 786 Chlorella variabilis hypothetical protein (CHLNCDRAFT_142159) mRNA, complete cds blastn 52 60.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
2944122 2944122 PRJNA345071_P_NODE_9623_length_246_cov_0.901734_g9583_i0 PRJNA345071 9623 246 0.901734 2.21826564 Scherffelia dubia 3190 Plants Plants 224 4.45e-54   NTclustered gi|13897311|emb|AJ312020.1| 3190 g9583 i0 83.74 57.7317073170732 246 31 99 7 4 246 331 92 Scherffelia dubia partial mRNA for luminal binding protein (bip gene), strain SAG 40.89 blastn 14202 224 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorodendrophyceae Chlorodendrales Chlorodendraceae Scherffelia Scherffelia dubia
5497087 5497087 PRJNA345071_P_NODE_9225_length_247_cov_0.896552_g9185_i0 PRJNA345071 9225 247 0.896552 2.21448344 Chlorella variabilis 554065 Plants Plants 219 2.08e-52   NTclustered gi|552815074|ref|XM_005844286.1| 554065 g9185 i0 86.058 18.8056680161943 208 24 83 5 8 213 2684 2888 Chlorella variabilis hypothetical protein (CHLNCDRAFT_58930) mRNA, complete cds blastn 4645 219 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
11273582 11273582 PRJNA345071_P_NODE_1889_length_409_cov_2.116071_g1849_i0 PRJNA345071 1889 409 2.116071 8.65473039 Helicosporidium sp. ATCC 5 1907511 Plants Plants 212 4.37e-62   NR KDD75584.1 1291522 g1849 i0 86.5 21.3740831295844 126 17 92.4 0 30 407 1 126 KDD75584.1 heat shock protein 90 Hsp90 [Helicosporidium sp. ATCC 50920] diamond 8742 212 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Helicosporidium Helicosporidium sp. ATCC 50920
17647999 17647999 PRJNA345071_P_NODE_2674_length_359_cov_1.867133_g2634_i0 PRJNA345071 2674 359 1.867133 6.70300747 Raphidocelis subcapitata 307507 Plants Plants 85.9 3.39e-17   NR GBF91776.1 307507 g2634 i0 61.3 0.626740947075209 75 29 62.7 0 3 227 211 285 GBF91776.1 60S acidic ribosomal protein P0 [Raphidocelis subcapitata] diamond 225 85.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Raphidocelis Raphidocelis subcapitata
26662941 26662941 PRJNA345071_P_NODE_5301_length_285_cov_1.792453_g5261_i0 PRJNA345071 5301 285 1.792453 5.10849105 Chlorella vulgaris 3077 Plants Plants 54.7 3.98e-6   NR KAL4853141.1 3077 g5261 i0 39.8 1.74736842105263 83 43 83.2 3 48 284 384 463 KAL4853141.1 putative exosome complex component rrp40 [Chlorella vulgaris] diamond 498 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
26790034 26790034 PRJNA345071_P_NODE_7321_length_256_cov_1.448087_g7281_i0 PRJNA345071 7321 256 1.448087 3.70710272 Haematococcus lacustris 44745 Plants Plants 119 1.11e-29   NR KAJ9514070.1 44745 g7281 i0 67.9 3.94921875 84 27 98.4 0 3 254 184 267 KAJ9514070.1 hypothetical protein QJQ45_021162 [Haematococcus lacustris] diamond 1011 119 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
27738492 27738492 PRJNA345071_P_NODE_3684_length_322_cov_1.670683_g3644_i0 PRJNA345071 3684 322 1.670683 5.37959926 Chlamydomonas sp. UWO 241 1653778 Plants Plants 78.2 3.37e-14   NR KAG1661530.1 1653778 g3644 i0 50 2.57142857142857 72 36 67.1 0 321 106 370 441 KAG1661530.1 hypothetical protein FOA52_000040 [Chlamydomonas sp. UWO 241] diamond 828 78.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. UWO 241
28243162 28243162 PRJNA345071_P_NODE_8766_length_249_cov_0.886364_g8726_i0 PRJNA345071 8766 249 0.886364 2.20704636 Volvox africanus 51714 Plants Plants 92.4 1.12e-19   NR GIL56269.1 51714 g8726 i0 54.3 4.91566265060241 81 37 97.6 0 246 4 72 152 GIL56269.1 hypothetical protein Vafri_11618 [Volvox africanus] diamond 1224 92.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox africanus
28464477 28464477 PRJNA345071_P_NODE_5646_length_280_cov_1.449275_g5606_i0 PRJNA345071 5646 280 1.449275 4.05797 Chlorella ohadii 2649997 Plants Plants 78.2 8.56e-15   NR KAI7836603.1 2649997 g5606 i0 64.7 0.546428571428571 51 18 54.6 0 278 126 253 303 KAI7836603.1 hypothetical protein COHA_009561 [Chlorella ohadii] diamond 153 78.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella ohadii
28653821 28653821 PRJNA345071_P_NODE_1047_length_522_cov_2.463252_g1007_i0 PRJNA345071 1047 522 2.463252 12.85817544 Astrephomene gubernaculifera 47775 Plants Plants 71.2 4.88e-11   NR GFR40019.1 47775 g1007 i0 49.2 0.729885057471264 63 32 36.2 0 503 315 90 152 GFR40019.1 hypothetical protein Agub_g554 [Astrephomene gubernaculifera] diamond 381 71.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Astrephomenaceae Astrephomene Astrephomene gubernaculifera
28828697 28828697 PRJNA345071_P_NODE_7908_length_252_cov_0.871508_g7868_i0 PRJNA345071 7908 252 0.871508 2.19620016 Chlorophyta 3041 Plants Plants 53.1 9.06e-6   NR XP_042914862.1 3055 g7868 i0 50 3.10714285714286 60 27 71.4 1 241 62 105 161 XP_042914862.1 uncharacterized protein CHLRE_17g729600v5 [Chlamydomonas reinhardtii] diamond 783 53.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
29159152 29159152 PRJNA345071_P_NODE_5209_length_287_cov_1.383178_g5169_i0 PRJNA345071 5209 287 1.383178 3.96972086 Micractinium sp. CCAP 211/92 554058 Plants Plants 43.1 0.0419   NR KAL4449393.1 554058 g5169 i0 40.8 0.742160278745645 71 40 73.2 2 223 14 215 284 KAL4449393.1 hypothetical protein ABPG77_007037 [Micractinium sp. CCAP 211/92] diamond 213 43.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium sp. CCAP 211/92
29302457 29302457 PRJNA345071_P_NODE_5329_length_285_cov_1.254717_g5289_i0 PRJNA345071 5329 285 1.254717 3.57594345 Chlorellaceae 35461 Plants Plants 90.5 2.04e-19   NR KAL4854802.1 3077 g5289 i0 59.6 6.58947368421053 89 34 93.7 1 2 268 103 189 KAL4854802.1 Ribonuclease P protein subunit p25-like protein [Chlorella vulgaris] diamond 1878 90.9 0.995599559955996 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
29428535 29428535 PRJNA345071_P_NODE_9069_length_248_cov_0.891429_g9029_i0 PRJNA345071 9069 248 0.891429 2.21074392 Scenedesmaceae 3086 Plants Plants 53.9 4.55e-6   NR WIA42212.1 3088 g9029 i0 41.4 1.69354838709677 70 41 84.7 0 2 211 252 321 WIA42212.1 hypothetical protein OEZ86_009472 [Tetradesmus obliquus] diamond 420 54.3 0.992633517495396 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
29460020 29460020 PRJNA345071_P_NODE_3990_length_313_cov_1.300000_g3950_i0 PRJNA345071 3990 313 1.3 4.069 Eukaryota 2759 Plants Plants 55.8 1.98e-6   NR KAK9819162.1 381761 g3950 i0 37.8 4.08306709265176 82 51 78.6 0 257 12 362 443 KAK9819162.1 hypothetical protein WJX81_005513 [Elliptochloris bilobata] diamond 1278 55.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Elliptochloris Elliptochloris bilobata
29663801 29663801 PRJNA345071_P_NODE_2430_length_372_cov_1.481605_g2390_i0 PRJNA345071 2430 372 1.481605 5.5115706 Tetradesmus obliquus 3088 Plants Plants 89.4 7.6e-18   NR WIA09660.1 3088 g2390 i0 50 0.725806451612903 90 44 72.6 1 359 90 655 743 WIA09660.1 hypothetical protein OEZ85_009046 [Tetradesmus obliquus] diamond 270 89.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
29663806 29663806 PRJNA345071_P_NODE_7830_length_252_cov_1.391061_g7790_i0 PRJNA345071 7830 252 1.391061 3.50547372 Pedinophyceae sp. YPF-7 765719 Plants Plants 87.8 2.87e-18   NR CAG9464428.1 765719 g7790 i0 47.1 1.01190476190476 85 43 98.8 1 2 250 52 136 CAG9464428.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 255 87.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
30264653 30264653 PRJNA345071_P_NODE_8952_length_248_cov_0.891429_g8912_i0 PRJNA345071 8952 248 0.891429 2.21074392 Coccomyxa viridis 1274662 Plants Plants 53.1 8.61e-6   NR CAK0735818.1 1274662 g8912 i0 47.3 0.665322580645161 55 27 66.5 1 245 81 371 423 CAK0735818.1 hypothetical protein CVIRNUC_000644 [Coccomyxa viridis] diamond 165 53.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
30408223 30408223 PRJNA345071_P_NODE_9233_length_247_cov_0.896552_g9193_i0 PRJNA345071 9233 247 0.896552 2.21448344 Coccomyxa 41891 Plants Plants 80.5 2.04e-15   NR XP_005645268.1 574566 g9193 i0 52.4 3.98380566801619 82 39 99.6 0 2 247 564 645 XP_005645268.1 hypothetical protein COCSUDRAFT_30425 [Coccomyxa subellipsoidea C-169] diamond 984 80.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
30597342 30597342 PRJNA345071_P_NODE_8373_length_250_cov_1.045198_g8333_i0 PRJNA345071 8373 250 1.045198 2.612995 Chlamydomonadales 3042 Plants Plants 152 5.76e-41   NR KAG2498794.1 47281 g8333 i0 95.1 29.508 82 4 98.4 0 2 247 374 455 KAG2498794.1 hypothetical protein HYH03_003531 [Edaphochlamys debaryana] diamond 7377 152 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana
30959503 30959503 PRJNA345071_P_NODE_6054_length_273_cov_1.560000_g6014_i0 PRJNA345071 6054 273 1.56 4.2588 Sanguina aurantia 2578422 Plants Plants 55.8 1.36e-6   NR MEW5315943.1 2578422 g6014 i0 39.1 3.18681318681319 92 44 94.5 2 13 270 117 202 MEW5315943.1 hypothetical protein [Sanguina aurantia] diamond 870 55.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Sanguina Sanguina aurantia
30991142 30991142 PRJNA345071_P_NODE_10214_length_244_cov_0.912281_g10174_i0 PRJNA345071 10214 244 0.912281 2.22596564 Chlorella desiccata (nom. nud.) 1650286 Plants Plants 63.9 1.32e-9   NR KAG7674028.1 1650286 g10174 i0 43.2 7.4016393442623 74 42 91 0 244 23 1057 1130 KAG7674028.1 hypothetical protein KSW81_007202 [Chlorella desiccata (nom. nud.)] diamond 1806 63.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'
31735306 31735306 PRJNA345071_P_NODE_10057_length_244_cov_1.824561_g10017_i0 PRJNA345071 10057 244 1.824561 4.45192884 Eukaryota 2759 Plants Plants 62.4 4.58e-9   NR WIA14053.1 3088 g10017 i0 37.3 4.53688524590164 75 47 92.2 0 7 231 640 714 WIA14053.1 hypothetical protein OEZ85_002607 [Tetradesmus obliquus] diamond 1107 62.8 0.993630573248408 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
31830162 31830162 PRJNA345071_P_NODE_6837_length_262_cov_1.650794_g6797_i0 PRJNA345071 6837 262 1.650794 4.32508028 Viridiplantae 33090 Plants Plants 118 1.3e-32   NR KAK9808445.1 706552 g6797 i0 70 5.56488549618321 80 22 90.5 2 3 239 4 82 KAK9808445.1 hypothetical protein WJX73_006634 [Symbiochloris irregularis] diamond 1458 118 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
32003020 32003020 PRJNA345071_P_NODE_6078_length_273_cov_1.170000_g6038_i0 PRJNA345071 6078 273 1.17 3.1941 Chlamydomonas eustigma 1157962 Plants Plants 108 1.42e-26   NR GAX74469.1 1157962 g6038 i0 57.5 1.75824175824176 80 34 87.9 0 6 245 21 100 GAX74469.1 hypothetical protein CEUSTIGMA_g1918.t1 [Chlamydomonas eustigma] diamond 480 108 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
32477785 32477785 PRJNA345071_P_NODE_3779_length_319_cov_2.105691_g3739_i0 PRJNA345071 3779 319 2.105691 6.71715429 Coccomyxa viridis 1274662 Plants Plants 122 1.98e-30   NR CAK0785623.1 1274662 g3739 i0 55.2 1.96551724137931 105 46 98.7 1 319 5 19 122 CAK0785623.1 hypothetical protein CVIRNUC_008834 [Coccomyxa viridis] diamond 627 122 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
32558367 32558367 PRJNA345071_P_NODE_10699_length_242_cov_0.923077_g10659_i0 PRJNA345071 10699 242 0.923077 2.23384634 Chlorophyta 3041 Plants Plants 45.4 0.00407   NR XP_042918089.1 3055 g10659 i0 37.1 3.85537190082645 70 42 84.3 1 240 37 116 185 XP_042918089.1 uncharacterized protein CHLRE_12g486550v5 [Chlamydomonas reinhardtii] diamond 933 45.8 0.991266375545852 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
32603993 32603993 PRJNA345071_P_NODE_4860_length_293_cov_1.254545_g4820_i0 PRJNA345071 4860 293 1.254545 3.67581685 Monoraphidium neglectum 145388 Plants Plants 138 7.52e-36   NR XP_013904350.1 145388 g4820 i0 70.1 4.60750853242321 87 26 89.1 0 21 281 395 481 XP_013904350.1 Thaumatin-like protein 2 [Monoraphidium neglectum] diamond 1350 138 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;