RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA345071", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 3 ✖

tax_phylum 1

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA345071 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27200986 27200986 PRJNA345071_P_NODE_4282_length_305_cov_1.784483_g4242_i0 PRJNA345071 4282 305 1.784483 5.44267315 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 60.8 3.03e-8   NR KAJ3449001.1 1746091 g4242 i0 36 1.75081967213115 89 51 82.6 2 271 20 5 92 KAJ3449001.1 c2 domain-containing protein [Anaeramoeba flamelloides] diamond 534 60.8 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
29506207 29506207 PRJNA345071_P_NODE_6130_length_272_cov_1.567839_g6090_i0 PRJNA345071 6130 272 1.567839 4.26452208 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 53.9 6.04e-6   NR KAJ3449419.1 1746091 g6090 i0 42.5 1.73161764705882 73 40 78.3 2 220 8 1 73 KAJ3449419.1 ovarian carcinoma antigen [Anaeramoeba flamelloides] diamond 471 53.9 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
32729997 32729997 PRJNA345071_P_NODE_6680_length_264_cov_1.628272_g6640_i0 PRJNA345071 6680 264 1.628272 4.29863808 Hexamita inflata 28002 Fornicata other_Eukaryota 45.1 0.0075   NR CAK8773617.1 28002 g6640 i0 33.3 1.63636363636364 72 42 79.5 2 217 8 152 219 CAK8773617.1 HINF_057391 [Hexamita inflata] diamond 432 45.1 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;