RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA342843" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA342843 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29506200 29506200 PRJNA342843_S_NODE_9750_length_199_cov_3.044304_g9600_i0 PRJNA342843 9750 199 3.044304 6.05816496 Chloroflexota bacterium 2026724 Bacteria Bacteria 59.3 3.01e-8   NR MDQ3689066.1 2026724 g9600 i0 57.4 0.919597989949749 61 26 92 0 16 198 704 764 MDQ3689066.1 chromosome segregation ATPase [Chloroflexota bacterium] diamond 183 59.3 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29948432 29948432 PRJNA342843_S_NODE_14051_length_160_cov_1.109244_g13901_i0 PRJNA342843 14051 160 1.109244 1.7747904 Chloroflexota bacterium 2026724 Bacteria Bacteria 58.5 3.07e-8   NR MDY6835112.1 2026724 g13901 i0 72.5 0.75 40 11 75 0 125 6 34 73 MDY6835112.1 hypothetical protein [Chloroflexota bacterium] diamond 120 58.5 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;