RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA342843" and tax_kingdom = "Thermotogati"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA342843 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1667479 1667479 PRJNA342843_S_NODE_14042_length_160_cov_1.218487_g13892_i0 PRJNA342843 14042 160 1.218487 1.9495792 Allomeiothermus silvanus 52022 Bacteria Bacteria 285 1.2e-72   NTclustered gi|296848933|gb|CP002042.1| 526227 g13892 i0 98.75 1 160 2 100 0 1 160 1981563 1981404 Meiothermus silvanus DSM 9946, complete genome blastn 160 285 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Allomeiothermus Allomeiothermus silvanus
32003014 32003014 PRJNA342843_S_NODE_7898_length_229_cov_1.351064_g7748_i0 PRJNA342843 7898 229 1.351064 3.09393656 Fervidobacterium sp. 1871331 Bacteria Bacteria 63.2 1.69e-9   NR HUM45271.1 1871331 g7748 i0 46.8 0.812227074235808 62 33 81.2 0 10 195 271 332 HUM45271.1 hypothetical protein [Fervidobacterium sp.] diamond 186 63.2 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;