RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA342843" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA342843 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28369545 28369545 PRJNA342843_S_NODE_15066_length_154_cov_0.973451_g14916_i0 PRJNA342843 15066 154 0.973451 1.49911454 Sulfolobaceae archaeon 2967306 Archaea Archaea 77.4 2.48e-16   NR MEM0173165.1 2967306 g14916 i0 82.6 0.896103896103896 46 7 89.6 1 17 154 100 144 MEM0173165.1 hypothetical protein [Sulfolobaceae archaeon] diamond 138 77.4 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae   Sulfolobaceae archaeon
30864533 30864533 PRJNA342843_S_NODE_10434_length_192_cov_1.165563_g10284_i0 PRJNA342843 10434 192 1.165563 2.23788096 Sulfolobaceae archaeon 2967306 Archaea Archaea 119 1.15e-31   NR MEM0173167.1 2967306 g10284 i0 90.5 0.984375 63 6 98.4 0 190 2 63 125 MEM0173167.1 hypothetical protein [Sulfolobaceae archaeon] diamond 189 119 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae   Sulfolobaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;