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contig_metadata

25 rows where bioproject = "PRJNA342843" and tax_kingdom = "Fungi"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Fungi · 25 ✖

tax_clade 1

bioproject 1

  • PRJNA342843 · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2943578 2943578 PRJNA342843_S_NODE_15703_length_150_cov_1.366972_g15553_i0 PRJNA342843 15703 150 1.366972 2.050458 Vanrija pseudolonga 143232 Fungi Fungi 217 4.089999999999999e-52   NTclustered gi|2153660029|gb|CP086722.1| 143232 g15553 i0 92.667 92.8466666666667 150 11 100 0 1 150 4989 4840 Vanrija pseudolonga isolate DUCC4014 mitochondrion, complete genome blastn 13927 217 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Vanrija Vanrija pseudolonga
4898118 4898118 PRJNA342843_S_NODE_11644_length_178_cov_6.124088_g11494_i0 PRJNA342843 11644 178 6.124088 10.90087664 root 1 Root_unresolved Root_unresolved 324 2.89e-84   NTclustered gi|2582615798|ref|XR_009468002.1| 5061 g11494 i0 100 98.4494382022472 175 0 98 0 4 178 2793 2619 Aspergillus niger 28S ribosomal RNA (28S rRNA), partial rRNA blastn 17524 324 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus niger
4898149 4898149 PRJNA342843_S_NODE_15344_length_152_cov_1.432432_g15194_i0 PRJNA342843 15344 152 1.432432 2.17729664 root 1 Root_unresolved Root_unresolved 281 1.46e-71   NTclustered gi|283827952|gb|EU019262.2| 29917 g15194 i0 100 99.9276315789474 152 0 100 0 1 152 2571 2420 Cladosporium cladosporioides strain CBS 109.21 28S large subunit ribosomal RNA gene, partial sequence blastn 15189 281 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
6173165 6173165 PRJNA342843_S_NODE_10565_length_190_cov_1.812081_g10415_i0 PRJNA342843 10565 190 1.812081 3.4429539 Penicillium 5073 Fungi Fungi 318 1.46e-82   NTclustered gi|1395777247|gb|MH443374.1| 5081 g10415 i0 96.859 100.478947368421 191 5 100 1 1 190 1031 841 Penicillium sp. strain ERL13-5 large subunit ribosomal RNA gene, partial sequence blastn 19091 318 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium sp.
8046040 8046040 PRJNA342843_S_NODE_11107_length_184_cov_1.412587_g10957_i0 PRJNA342843 11107 184 1.412587 2.59916008 Vanrija pseudolonga 143232 Fungi Fungi 324 3.01e-84   NTclustered gi|2153660029|gb|CP086722.1| 143232 g10957 i0 98.37 11.5054347826087 184 3 100 0 1 184 17257 17440 Vanrija pseudolonga isolate DUCC4014 mitochondrion, complete genome blastn 2117 324 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Vanrija Vanrija pseudolonga
8046304 8046304 PRJNA342843_S_NODE_4827_length_311_cov_3.670370_g4677_i0 PRJNA342843 4827 311 3.67037 11.4148507 Malassezia restricta 76775 Fungi Fungi 569 6.489999999999998e-158   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g4677 i0 99.678 80.6109324758842 311 1 100 0 1 311 3310 3000 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 25070 569 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
8046453 8046453 PRJNA342843_S_NODE_8527_length_218_cov_0.988701_g8377_i0 PRJNA342843 8527 218 0.988701 2.15536818 Malassezia restricta 76775 Fungi Fungi 206 1.4e-48   NTclustered gi|1546632402|ref|XM_027627861.1| 76775 g8377 i0 100 37.9220183486239 111 0 51 0 106 216 1383 1273 Malassezia restricta elongation factor 1-alpha (MRET_1234), partial mRNA blastn 8267 206 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
8722837 8722837 PRJNA342843_S_NODE_13667_length_162_cov_2.818182_g13517_i0 PRJNA342843 13667 162 2.818182 4.56545484 Fungi 4751 Fungi Fungi 294 2.03e-75   NTclustered gi|915512607|gb|KP825390.1| 76775 g13517 i0 99.383 100 162 1 100 0 1 162 212 51 Malassezia restricta strain ISOSEB19F 28S ribosomal RNA gene, partial sequence blastn 16200 294 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
8722881 8722881 PRJNA342843_S_NODE_3727_length_369_cov_4.420732_g3577_i0 PRJNA342843 3727 369 4.420732 16.31250108 Opisthokonta 33154 Fungi Fungi 625 1.6499999999999996e-174   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g3577 i0 97.283 96.4579945799458 368 10 99 0 1 368 318 685 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 35593 628 0.995222929936306 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
9320883 9320883 PRJNA342843_S_NODE_14588_length_157_cov_0.982759_g14438_i0 PRJNA342843 14588 157 0.982759 1.54293163 Amanita phalloides 67723 Fungi Fungi 119 1.26e-22   NTclustered gi|196968055|gb|EU909434.1| 67723 g14438 i0 94.737 0.484076433121019 76 4 48 0 1 76 1247 1322 Amanita phalloides voucher Am.pha.Cor02.1 5S ribosomal RNA gene, partial sequence; intergenic spacer, complete sequence; and 18S ribosomal RNA gene, partial sequence blastn 76 119 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Amanitaceae Amanita Amanita phalloides
12548790 12548790 PRJNA342843_S_NODE_11330_length_182_cov_1.148936_g11180_i0 PRJNA342843 11330 182 1.148936 2.09106352 Hypocreales 5125 Fungi Fungi 209 8.68e-50   NTclustered gi|2749493244|gb|PP952401.1| 51453 g11180 i0 87.432 100.450549450549 183 22 100 1 1 182 7896 8078 Trichoderma reesei mitochondrion, complete genome blastn 18282 211 0.990521327014218 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Hypocreaceae Trichoderma Trichoderma reesei
12548801 12548801 PRJNA342843_S_NODE_12310_length_173_cov_1.000000_g12160_i0 PRJNA342843 12310 173 1 1.73 Saccharomyces 4930 Fungi Fungi 320 3.61e-83   NTclustered gi|488162|gb|U00062.1|YSCH8179 4932 g12160 i0 100 8.97687861271676 173 0 100 0 1 173 38785 38613 Saccharomyces cerevisiae chromosome VIII cosmid 8179 blastn 1553 320 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
13146699 13146699 PRJNA342843_S_NODE_5671_length_280_cov_2.355649_g5521_i0 PRJNA342843 5671 280 2.355649 6.5958172 uncultured fungus 175245 Fungi Fungi 512 9.85e-141   NTclustered gi|507143256|gb|KC674849.1| 175245 g5521 i0 99.643 100 280 1 100 0 1 280 369 90 Uncultured fungus clone nco89e02c1 18S ribosomal RNA gene, partial sequence blastn 28000 512 1 Eukaryota Opisthokonta Fungi           uncultured fungus
15695537 15695537 PRJNA342843_S_NODE_15713_length_150_cov_1.247706_g15563_i0 PRJNA342843 15713 150 1.247706 1.871559 Vanrija pseudolonga 143232 Fungi Fungi 230 5.26e-56   NTclustered gi|2153660029|gb|CP086722.1| 143232 g15563 i0 94.595 2.78666666666667 148 8 99 0 3 150 19002 19149 Vanrija pseudolonga isolate DUCC4014 mitochondrion, complete genome blastn 418 230 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Vanrija Vanrija pseudolonga
17647969 17647969 PRJNA342843_S_NODE_7854_length_230_cov_1.185185_g7704_i0 PRJNA342843 7854 230 1.185185 2.7259255 Nectriaceae 110618 Fungi Fungi 359 1.0799999999999999e-94   NTclustered gi|1859735559|gb|MT644877.1| 29855 g7704 i0 94.783 100.008695652174 230 12 100 0 1 230 3620 3849 Nectria cinnabarina isolate DM1152 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 23002 359 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Nectria Nectria cinnabarina
18244411 18244411 PRJNA342843_S_NODE_13055_length_167_cov_1.317460_g12905_i0 PRJNA342843 13055 167 1.31746 2.2001582 Vanrija pseudolonga 143232 Fungi Fungi 261 2.14e-65   NTclustered gi|2153660029|gb|CP086722.1| 143232 g12905 i0 95.181 0.994011976047904 166 7 99 1 3 167 4392 4227 Vanrija pseudolonga isolate DUCC4014 mitochondrion, complete genome blastn 166 261 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Vanrija Vanrija pseudolonga
18244464 18244464 PRJNA342843_S_NODE_14775_length_155_cov_2.991228_g14625_i0 PRJNA342843 14775 155 2.991228 4.6364034 uncultured Malassezia 338567 Fungi Fungi 287 3.21e-73   NTclustered gi|452886704|gb|KC143564.1| 338567 g14625 i0 100 100 155 0 100 0 1 155 105 259 Uncultured Malassezia clone CEobese209 large subunit ribosomal RNA gene, partial sequence blastn 15500 287 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae   uncultured Malassezia
19519014 19519014 PRJNA342843_S_NODE_9636_length_201_cov_1.568750_g9486_i0 PRJNA342843 9636 201 1.56875 3.1531875 Papiliotrema laurentii 5418 Fungi Fungi 130 7.850000000000001e-26   NTclustered gi|806385942|emb|LK023896.1| 5418 g9486 i0 100 30.7611940298507 70 0 35 0 132 201 686 755 Cryptococcus laurentii genomic DNA containing partial 26S gene, 26S-5S IGS and partial 5S gene, strain CBS 139 blastn 6183 130 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Rhynchogastremaceae Papiliotrema Papiliotrema laurentii
20196355 20196355 PRJNA342843_S_NODE_12936_length_168_cov_0.968504_g12786_i0 PRJNA342843 12936 168 0.968504 1.62708672 Parengyodontium 1892809 Fungi Fungi 122 1.06e-23   NTclustered gi|1125812533|ref|NC_032302.1| 37998 g12786 i0 97.222 0.857142857142857 72 2 43 0 12 83 4754 4825 Parengyodontium album voucher ATCC:56482 mitochondrion, complete genome blastn 144 122 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Cordycipitaceae Parengyodontium Parengyodontium album
20794179 20794179 PRJNA342843_S_NODE_11657_length_178_cov_2.751825_g11507_i0 PRJNA342843 11657 178 2.751825 4.8982485 uncultured fungus 175245 Fungi Fungi 324 2.89e-84   NTclustered gi|118161697|gb|EF094184.1| 175245 g11507 i0 99.438 100 178 1 100 0 1 178 137 314 Uncultured fungus clone Ms-V245 18S ribosomal RNA gene, partial sequence blastn 17800 324 1 Eukaryota Opisthokonta Fungi           uncultured fungus
21471982 21471982 PRJNA342843_S_NODE_10857_length_186_cov_5.875862_g10707_i0 PRJNA342843 10857 186 5.875862 10.92910332 Malassezia 55193 Fungi Fungi 344 2.34e-90   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g10707 i0 100 103.940860215054 186 0 100 0 1 186 2442 2627 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 19333 344 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
22747166 22747166 PRJNA342843_S_NODE_10058_length_196_cov_1.283871_g9908_i0 PRJNA342843 10058 196 1.283871 2.51638716 Fusarium 5506 Fungi Fungi 363 6.899999999999998e-96   NTclustered gi|270741092|gb|FJ883667.1| 698999 g9908 i0 100 99.9081632653061 196 0 100 0 1 196 228 33 Fusarium sp. DB 40 28S ribosomal RNA gene, partial sequence; 28S-18S ribosomal RNA intergenic spacer, complete sequence; and 18S ribosomal RNA gene, partial sequence blastn 19582 363 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Fusarium Fusarium sp. DB 40
24619105 24619105 PRJNA342843_S_NODE_2620_length_467_cov_4.558685_g2471_i0 PRJNA342843 2620 467 4.558685 21.28905895 Malassezia restricta 76775 Fungi Fungi 857 0   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g2471 i0 99.786 106.44539614561 467 1 100 0 1 467 1479 1945 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 49710 857 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
25296508 25296508 PRJNA342843_S_NODE_13620_length_163_cov_1.196721_g13470_i0 PRJNA342843 13620 163 1.196721 1.95065523 Fusarium 5506 Fungi Fungi 241 2.7000000000000008e-59   NTclustered gi|1839127146|gb|MT010921.1| 48493 g13470 i0 93.252 94.2515337423313 163 11 100 0 1 163 22131 21969 Fusarium lactis culture CBS:411.97 strain CBS 411.97 mitochondrion, complete genome blastn 15363 241 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Fusarium Fusarium lactis
28527710 28527710 PRJNA342843_S_NODE_3807_length_363_cov_7.947205_g3657_i0 PRJNA342843 3807 363 7.947205 28.84835415 Dichomitus squalens 114155 Fungi Fungi 42.7 0.0469   NR TBU63310.1 114155 g3657 i0 36.3 0.661157024793388 80 45 63.6 2 114 344 21 97 TBU63310.1 hypothetical protein BD310DRAFT_842258, partial [Dichomitus squalens] diamond 240 42.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Dichomitus Dichomitus squalens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;