RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA342843", tax_clade = "Opisthokonta" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA342843 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8046139 8046139 PRJNA342843_S_NODE_14327_length_158_cov_1.504274_g14177_i0 PRJNA342843 14327 158 1.5042739999999999 2.37675292 Notodromas monacha 399045 Arthropoda Arthropoda 281 1.53e-71   NTclustered gi|1938055242|emb|OA888849.1| 399045 g14177 i0 98.734 40.1645569620253 158 2 100 0 1 158 566 409 Notodromas monacha blastn 6346 281 1 Eukaryota Opisthokonta Metazoa Arthropoda Ostracoda Podocopida Cyprididae Notodromas Notodromas monacha
14421476 14421476 PRJNA342843_S_NODE_10432_length_192_cov_1.211921_g10282_i0 PRJNA342843 10432 192 1.211921 2.32688832 Satyrium ilicis 876074 Arthropoda Arthropoda 52.8 0.017   NTclustered gi|2918386088|emb|OZ238121.1| 876074 g10282 i0 100 0.145833333333333 28 0 15 0 73 100 23317818 23317845 Satyrium ilicis genome assembly, chromosome: 12 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Lepidoptera Lycaenidae Satyrium Satyrium ilicis
14421812 14421812 PRJNA342843_S_NODE_5872_length_275_cov_1.089744_g5722_i0 PRJNA342843 5872 275 1.089744 2.996796 Notodromas monacha 399045 Arthropoda Arthropoda 492 1.26e-134   NTclustered gi|1938055242|emb|OA888849.1| 399045 g5722 i0 98.909 27.9090909090909 275 3 100 0 1 275 1804 2078 Notodromas monacha blastn 7675 492 1 Eukaryota Opisthokonta Metazoa Arthropoda Ostracoda Podocopida Cyprididae Notodromas Notodromas monacha

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;