RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA340009" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA340009 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18244055 18244055 PRJNA340009_P_NODE_67115_length_165_cov_0.879310_g66808_i0 PRJNA340009 67115 165 0.87931 1.4508615 Fidelibacterota bacterium 2026760 Bacteria Bacteria 94 7.360000000000001e-21   NR MCD6336996.1 2026760 g66808 i0 78 1.81818181818182 50 11 90.9 0 11 160 264 313 MCD6336996.1 phosphopyruvate hydratase [Fidelibacterota bacterium] diamond 300 94 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
26948052 26948052 PRJNA340009_P_NODE_61302_length_167_cov_3.025424_g60995_i0 PRJNA340009 61302 167 3.025424 5.05245808 Fidelibacterota bacterium 2026760 Bacteria Bacteria 103 4.47e-25   NR MCH7733298.1 2026760 g60995 i0 83.3 11.6407185628743 54 9 97 0 6 167 1 54 MCH7733298.1 class II glutamine amidotransferase [Fidelibacterota bacterium] diamond 1944 103 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
27200925 27200925 PRJNA340009_P_NODE_14682_length_309_cov_0.903846_g14375_i0 PRJNA340009 14682 309 0.903846 2.79288414 Fidelibacterota bacterium 2026760 Bacteria Bacteria 100 2.1599999999999998e-23   NR MCJ7802071.1 2026760 g14375 i0 50 0.951456310679612 98 47 93.2 2 1 288 154 251 MCJ7802071.1 lipase family protein [Fidelibacterota bacterium] diamond 294 100 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
28734185 28734185 PRJNA340009_P_NODE_45147_length_191_cov_1.718310_g44840_i0 PRJNA340009 45147 191 1.71831 3.2819721 Pseudomonadati 3379134 Bacteria Bacteria 106 5.67e-26   NR MFB0515946.1 2026760 g44840 i0 85.7 2.96858638743455 63 9 99 0 191 3 40 102 MFB0515946.1 pyridoxal-phosphate dependent enzyme [Fidelibacterota bacterium] diamond 567 106 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
28748473 28748473 PRJNA340009_P_NODE_7647_length_403_cov_2.302260_g7340_i0 PRJNA340009 7647 403 2.30226 9.2781078 Fidelibacterota bacterium 2026760 Bacteria Bacteria 48.9 0.00148   NR MBT5268102.1 2026760 g7340 i0 36.1 0.722084367245658 97 53 71.5 3 383 96 980 1068 MBT5268102.1 hypothetical protein [Fidelibacterota bacterium] diamond 291 48.9 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
29916954 29916954 PRJNA340009_P_NODE_8611_length_385_cov_1.485119_g8304_i0 PRJNA340009 8611 385 1.485119 5.71770815 Fidelibacterota bacterium 2026760 Bacteria Bacteria 65.9 1.56e-9   NR MBT5268102.1 2026760 g8304 i0 32.8 0.950649350649351 122 69 94.3 2 1 363 869 978 MBT5268102.1 hypothetical protein [Fidelibacterota bacterium] diamond 366 65.9 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32256459 32256459 PRJNA340009_P_NODE_67818_length_165_cov_0.870690_g67511_i0 PRJNA340009 67818 165 0.87069 1.4366385 Fidelibacterota bacterium 2026760 Bacteria Bacteria 83.6 5.41e-17   NR MDD5229691.1 2026760 g67511 i0 76.4 1 55 13 100 0 1 165 234 288 MDD5229691.1 primase C-terminal domain-containing protein [Fidelibacterota bacterium] diamond 165 83.6 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;