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contig_metadata

32 rows where bioproject = "PRJNA340009" and tax_phylum = "Elusimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Elusimicrobiota · 32 ✖

tax_kingdom 1

bioproject 1

  • PRJNA340009 · 32 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18244117 18244117 PRJNA340009_P_NODE_73655_length_162_cov_0.902655_g73348_i0 PRJNA340009 73655 162 0.902655 1.4623011 uncultured Elusimicrobia bacterium 699876 Bacteria Bacteria 54.7 0.004   NTclustered gi|2874253783|emb|OY969767.1| 699876 g73348 i0 100 0.179012345679012 29 0 18 0 1 29 1498851 1498823 MAG: uncultured Elusimicrobia bacterium isolate MFD00032.bin.c.1 genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria   Pseudomonadati Elusimicrobiota Elusimicrobia       uncultured Elusimicrobia bacterium
24618679 24618679 PRJNA340009_P_NODE_71900_length_163_cov_0.894737_g71593_i0 PRJNA340009 71900 163 0.894737 1.45842131 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 62.4 1.49e-9   NR HOW27525.1 2030800 g71593 i0 58 0.920245398773006 50 21 92 0 159 10 634 683 HOW27525.1 TolC family protein [Elusimicrobiota bacterium] diamond 150 62.4 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
26853460 26853460 PRJNA340009_P_NODE_76741_length_161_cov_0.910714_g76434_i0 PRJNA340009 76741 161 0.910714 1.46624954 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 72.4 2.86e-14   NR MBK8871896.1 2030800 g76434 i0 80.5 0.763975155279503 41 8 76.4 0 126 4 53 93 MBK8871896.1 hypothetical protein [Elusimicrobiota bacterium] diamond 123 72.4 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
26979757 26979757 PRJNA340009_P_NODE_61762_length_167_cov_1.372881_g61455_i0 PRJNA340009 61762 167 1.372881 2.29271127 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 44.3 0.00388   NR MFH0947536.1 2030800 g61455 i0 55.3 0.682634730538922 38 17 68.3 0 115 2 1345 1382 MFH0947536.1 hypothetical protein [Elusimicrobiota bacterium] diamond 114 44.3 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
27200962 27200962 PRJNA340009_P_NODE_62642_length_167_cov_0.864407_g62335_i0 PRJNA340009 62642 167 0.864407 1.44355969 Elusimicrobia bacterium RIFCSPHIGHO2_ 1797941 Bacteria Bacteria 50.4 2.05e-5   NR OGR83767.1 1797941 g62335 i0 47.3 0.988023952095808 55 23 89.8 2 150 1 3 56 OGR83767.1 MAG: hypothetical protein A2636_05095 [Elusimicrobia bacterium RIFCSPHIGHO2_01_FULL_64_10] diamond 165 50.4 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobia bacterium RIFCSPHIGHO2_01_FULL_64_10
27675191 27675191 PRJNA340009_P_NODE_39824_length_201_cov_9.822368_g39517_i0 PRJNA340009 39824 201 9.822368 19.74295968 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 78.6 5.03e-15   NR MBI4060437.1 2030800 g39517 i0 67.3 0.776119402985075 52 17 77.6 0 44 199 29 80 MBI4060437.1 PKD domain-containing protein [Elusimicrobiota bacterium] diamond 156 78.6 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
28338055 28338055 PRJNA340009_P_NODE_40726_length_199_cov_62.460000_g40419_i0 PRJNA340009 40726 199 62.46 124.2954 Elusimicrobia bacterium RIFCSPLOWO2_ 1797947 Bacteria Bacteria 50.4 3.98e-5   NR OGR87697.1 1797947 g40419 i0 71 0.467336683417085 31 9 46.7 0 147 55 187 217 OGR87697.1 MAG: hypothetical protein A3A86_06695 [Elusimicrobia bacterium RIFCSPLOWO2_01_FULL_60_11] diamond 93 50.4 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobia bacterium RIFCSPLOWO2_01_FULL_60_11
28464386 28464386 PRJNA340009_P_NODE_22106_length_258_cov_8.789474_g21799_i0 PRJNA340009 22106 258 8.789474 22.67684292 Elusimicrobia bacterium GWA2_38_7 1797920 Bacteria Bacteria 80.1 3.17e-15   NR OGR55298.1 1797920 g21799 i0 47 1.93023255813953 83 44 96.5 0 256 8 251 333 OGR55298.1 MAG: hypothetical protein A2034_05715 [Elusimicrobia bacterium GWA2_38_7] diamond 498 80.1 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobia bacterium GWA2_38_7
28653805 28653805 PRJNA340009_P_NODE_73687_length_162_cov_0.902655_g73380_i0 PRJNA340009 73687 162 0.902655 1.4623011 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 48.9 8.42e-5   NR MBD3272584.1 2030800 g73380 i0 48.9 0.87037037037037 47 24 87 0 147 7 1 47 MBD3272584.1 group II intron reverse transcriptase/maturase [Elusimicrobiota bacterium] diamond 141 48.9 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
28671097 28671097 PRJNA340009_P_NODE_23327_length_252_cov_8.206897_g23020_i0 PRJNA340009 23327 252 8.206897 20.68138044 Bacteria 2 Bacteria Bacteria 46.6 0.00116   NR OGR83404.1 1797945 g23020 i0 35.4 1.52380952380952 65 42 77.4 0 4 198 123 187 OGR83404.1 MAG: hypothetical protein A2901_03490 [Elusimicrobia bacterium RIFCSPLOWO2_01_FULL_54_10] diamond 384 47 0.991489361702128 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobia bacterium RIFCSPLOWO2_01_FULL_54_10
28685491 28685491 PRJNA340009_P_NODE_20107_length_269_cov_3.086364_g19800_i0 PRJNA340009 20107 269 3.086364 8.30231916 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 78.2 6.15e-16   NR MBI3012094.1 2030800 g19800 i0 89.5 0.847583643122677 38 4 42.4 0 115 2 2 39 MBI3012094.1 8-oxo-dGTP diphosphatase [Elusimicrobiota bacterium] diamond 228 78.2 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
28955373 28955373 PRJNA340009_P_NODE_50648_length_182_cov_3.233083_g50341_i0 PRJNA340009 50648 182 3.233083 5.88421106 Pseudomonadati 3379134 Bacteria Bacteria 54.3 1.33e-6   NR OGR58926.1 1797927 g50341 i0 80.6 6.26373626373626 31 6 51.1 0 107 15 1 31 OGR58926.1 MAG: type IV pili twitching motility protein PilT [Elusimicrobia bacterium GWA2_69_24] diamond 1140 54.7 0.992687385740402 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobia bacterium GWA2_69_24
29190602 29190602 PRJNA340009_P_NODE_32889_length_218_cov_7.538462_g32582_i0 PRJNA340009 32889 218 7.538462 16.43384716 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 92 7.01e-20   NR MBI4348089.1 2030800 g32582 i0 60.9 1.77522935779817 64 25 88.1 0 4 195 345 408 MBI4348089.1 hypothetical protein [Elusimicrobiota bacterium] diamond 387 92 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
29285036 29285036 PRJNA340009_P_NODE_19549_length_272_cov_6.668161_g19242_i0 PRJNA340009 19549 272 6.668161 18.13739792 Elusimicrobia bacterium RIFOXYD2_FULL_34_15 1797973 Bacteria Bacteria 70.1 4.62e-12   NR OGS46370.1 1797973 g19242 i0 59.1 1.42279411764706 44 18 48.5 0 123 254 2 45 OGS46370.1 MAG: hypothetical protein A2539_01140 [Elusimicrobia bacterium RIFOXYD2_FULL_34_15] diamond 387 70.1 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobia bacterium RIFOXYD2_FULL_34_15
29537771 29537771 PRJNA340009_P_NODE_72310_length_163_cov_0.894737_g72003_i0 PRJNA340009 72310 163 0.894737 1.45842131 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 97.1 2.06e-24   NR NNN07494.1 2030800 g72003 i0 88.7 0.975460122699387 53 6 97.5 0 162 4 46 98 NNN07494.1 DUF5615 family PIN-like protein [Elusimicrobiota bacterium] diamond 159 97.1 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
29681020 29681020 PRJNA340009_P_NODE_70670_length_163_cov_1.789474_g70363_i0 PRJNA340009 70670 163 1.789474 2.91684262 Bacteria 2 Bacteria Bacteria 58.5 3.09e-8   NR OGS08813.1 1797953 g70363 i0 65.2 3.99386503067485 46 15 84.7 1 7 144 163 207 OGS08813.1 MAG: hypothetical protein A2204_08320 [Elusimicrobia bacterium RIFOXYA1_FULL_47_7] diamond 651 58.5 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobia bacterium RIFOXYA1_FULL_47_7
29758720 29758720 PRJNA340009_P_NODE_50711_length_182_cov_2.390977_g50404_i0 PRJNA340009 50711 182 2.390977 4.35157814 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 84.3 3.17e-17   NR MBI3012392.1 2030800 g50404 i0 70 1.97802197802198 60 18 98.9 0 2 181 65 124 MBI3012392.1 ATP-dependent DNA helicase RecG [Elusimicrobiota bacterium] diamond 360 84.3 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
29885331 29885331 PRJNA340009_P_NODE_64851_length_166_cov_0.871795_g64544_i0 PRJNA340009 64851 166 0.871795 1.4471797 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 42 0.025   NR MEK7858450.1 2030800 g64544 i0 56.4 0.704819277108434 39 17 70.5 0 118 2 4 42 MEK7858450.1 hypothetical protein [Elusimicrobiota bacterium] diamond 117 42 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
29885334 29885334 PRJNA340009_P_NODE_66531_length_165_cov_0.879310_g66224_i0 PRJNA340009 66531 165 0.87931 1.4508615 Candidatus Obscuribacterium magneticum 3022680 Bacteria Bacteria 49.7 3.16e-6   NR MCB4757530.1 3022680 g66224 i0 71 0.563636363636364 31 9 56.4 0 162 70 35 65 MCB4757530.1 type II toxin-antitoxin system VapB family antitoxin [Candidatus Obscuribacterium magneticum] diamond 93 49.7 1 Bacteria   Pseudomonadati Elusimicrobiota Elusimicrobia     Candidatus Obscuribacterium Candidatus Obscuribacterium magneticum
30485507 30485507 PRJNA340009_P_NODE_65473_length_166_cov_0.871795_g65166_i0 PRJNA340009 65473 166 0.871795 1.4471797 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 103 3.64e-24   NR MBI4387236.1 2030800 g65166 i0 83.3 0.975903614457831 54 9 97.6 0 1 162 159 212 MBI4387236.1 hypothetical protein [Elusimicrobiota bacterium] diamond 162 103 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
30517059 30517059 PRJNA340009_P_NODE_60133_length_169_cov_1.683333_g59826_i0 PRJNA340009 60133 169 1.683333 2.84483277 Elusimicrobia bacterium RIFCSPHIGHO2_ 1797941 Bacteria Bacteria 58.9 2.69e-8   NR OGR83952.1 1797941 g59826 i0 50 0.958579881656805 54 27 95.9 0 166 5 609 662 OGR83952.1 MAG: hypothetical protein A2636_04245 [Elusimicrobia bacterium RIFCSPHIGHO2_01_FULL_64_10] diamond 162 58.9 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobia bacterium RIFCSPHIGHO2_01_FULL_64_10
30611709 30611709 PRJNA340009_P_NODE_69493_length_164_cov_0.886957_g69186_i0 PRJNA340009 69493 164 0.886957 1.45460948 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 86.3 2.55e-19   NR MFN0118255.1 2030800 g69186 i0 74.5 0.932926829268293 51 13 93.3 0 10 162 136 186 MFN0118255.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Elusimicrobiota bacterium] diamond 153 86.3 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
30896350 30896350 PRJNA340009_P_NODE_50114_length_183_cov_2.261194_g49807_i0 PRJNA340009 50114 183 2.261194 4.13798502 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 51.6 1.14e-5   NR MBI3550324.1 2030800 g49807 i0 63 0.754098360655738 46 17 75.4 0 5 142 250 295 MBI3550324.1 class I SAM-dependent methyltransferase [Elusimicrobiota bacterium] diamond 138 51.6 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
30959465 30959465 PRJNA340009_P_NODE_66574_length_165_cov_0.879310_g66267_i0 PRJNA340009 66574 165 0.87931 1.4508615 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 83.2 3.03e-18   NR MBI2915455.1 2030800 g66267 i0 65.4 0.945454545454545 52 18 94.5 0 158 3 42 93 MBI2915455.1 HAD family hydrolase [Elusimicrobiota bacterium] diamond 156 83.2 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
30991089 30991089 PRJNA340009_P_NODE_35234_length_212_cov_2.276074_g34927_i0 PRJNA340009 35234 212 2.276074 4.82527688 Elusimicrobia bacterium RIFCSPLOWO2_ 1797947 Bacteria Bacteria 100 1.1399999999999999e-23   NR OGR87600.1 1797947 g34927 i0 70 0.990566037735849 70 18 94.8 2 4 204 43 112 OGR87600.1 MAG: ATP synthase F1 subunit gamma [Elusimicrobia bacterium RIFCSPLOWO2_01_FULL_60_11] diamond 210 100 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobia bacterium RIFCSPLOWO2_01_FULL_60_11
31022658 31022658 PRJNA340009_P_NODE_64895_length_166_cov_0.871795_g64588_i0 PRJNA340009 64895 166 0.871795 1.4471797 Elusimicrobia bacterium RIFCSPHIGHO2_ 1797941 Bacteria Bacteria 62.4 3.4e-10   NR OGR83792.1 1797941 g64588 i0 62.2 0.813253012048193 45 17 81.3 0 165 31 109 153 OGR83792.1 MAG: hypothetical protein A2636_03280 [Elusimicrobia bacterium RIFCSPHIGHO2_01_FULL_64_10] diamond 135 62.4 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobia bacterium RIFCSPHIGHO2_01_FULL_64_10
31275374 31275374 PRJNA340009_P_NODE_69815_length_164_cov_0.886957_g69508_i0 PRJNA340009 69815 164 0.886957 1.45460948 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 61.2 2.95e-9   NR MBI4425390.1 2030800 g69508 i0 56.9 1.86585365853659 51 22 93.3 0 6 158 88 138 MBI4425390.1 replication-relaxation family protein [Elusimicrobiota bacterium] diamond 306 61.2 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
31813132 31813132 PRJNA340009_P_NODE_66397_length_165_cov_0.879310_g66090_i0 PRJNA340009 66397 165 0.87931 1.4508615 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 48.5 1.17e-4   NR MFN0118181.1 2030800 g66090 i0 45.3 1.89090909090909 53 29 96.4 0 164 6 249 301 MFN0118181.1 hypothetical protein [Elusimicrobiota bacterium] diamond 312 48.5 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
31988470 31988470 PRJNA340009_P_NODE_75998_length_161_cov_0.910714_g75691_i0 PRJNA340009 75998 161 0.910714 1.46624954 Bacteria 2 Bacteria Bacteria 85.1 1.42e-17   NR OGR50687.1 1797920 g75691 i0 75.5 6.93167701863354 53 13 98.8 0 161 3 339 391 OGR50687.1 MAG: elongation factor 4 [Elusimicrobia bacterium GWA2_38_7] diamond 1116 85.5 0.9953216374269 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobia bacterium GWA2_38_7
32066149 32066149 PRJNA340009_P_NODE_69358_length_164_cov_0.886957_g69051_i0 PRJNA340009 69358 164 0.886957 1.45460948 Elusimicrobia bacterium RIFCSPLOWO2_ 1797950 Bacteria Bacteria 99.4 2.84e-23   NR OGS06191.1 1797950 g69051 i0 94.1 0.932926829268293 51 3 93.3 0 156 4 56 106 OGS06191.1 MAG: hypothetical protein A3I76_01135, partial [Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_61_11] diamond 153 99.4 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_61_11
32097808 32097808 PRJNA340009_P_NODE_60958_length_168_cov_1.571429_g60651_i0 PRJNA340009 60958 168 1.571429 2.64000072 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 79.7 1.13e-15   NR MDE2426665.1 2030800 g60651 i0 77.6 1.75 49 11 87.5 0 157 11 240 288 MDE2426665.1 N4-gp56 family major capsid protein [Elusimicrobiota bacterium] diamond 294 79.7 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
32319742 32319742 PRJNA340009_P_NODE_79859_length_154_cov_3.885714_g79552_i0 PRJNA340009 79859 154 3.885714 5.98399956 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 62.4 1.3e-9   NR MFH1724120.1 2030800 g79552 i0 67.4 0.896103896103896 46 15 89.6 0 8 145 2346 2391 MFH1724120.1 fibronectin type III domain-containing protein [Elusimicrobiota bacterium] diamond 138 62.4 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;