RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA340009" and tax_phylum = "Cryptomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA340009 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20793313 20793313 PRJNA340009_P_NODE_17977_length_282_cov_32.339056_g17670_i0 PRJNA340009 17977 282 32.339056 91.19613792 Rozella sp. JEL347 276837 Fungi Fungi 257 5.1400000000000006e-64   NTclustered gi|82398068|gb|DQ273766.1| 276837 g17670 i0 83.688 102.336879432624 282 37 100 6 1 282 2387 2659 Rozella sp. JEL347 isolate AFTOL-ID 16 28S ribosomal RNA gene, partial sequence blastn 28859 257 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella sp. JEL347
26631574 26631574 PRJNA340009_P_NODE_46981_length_188_cov_1.690647_g46674_i0 PRJNA340009 46981 188 1.690647 3.17841636 Rozella allomycis CSF55 988480 Fungi Fungi 65.1 2.32e-10   NR RKP18640.1 988480 g46674 i0 58.9 1.8031914893617 56 22 89.4 1 174 7 293 347 RKP18640.1 hypothetical protein ROZALSC1DRAFT_29690 [Rozella allomycis CSF55] diamond 339 65.1 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
31686430 31686430 PRJNA340009_P_NODE_11577_length_341_cov_1.154110_g11270_i0 PRJNA340009 11577 341 1.15411 3.9355151 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 68.2 1.38e-10   NR PJF17455.1 1246581 g11270 i0 47.1 1.79472140762463 68 36 59.8 0 14 217 82 149 PJF17455.1 Pkinase-domain-containing protein, partial [Paramicrosporidium saccamoebae] diamond 612 68.2 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;