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contig_metadata

18 rows where bioproject = "PRJNA340009" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 18 ✖

tax_clade 1

bioproject 1

  • PRJNA340009 · 18 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1667005 1667005 PRJNA340009_P_NODE_60482_length_168_cov_3.941176_g60175_i0 PRJNA340009 60482 168 3.941176 6.62117568 Phytocercomonas venanatans 2065209 SAR_Eukaryotes SAR_Eukaryotes 154 3.76e-33   NTclustered gi|1315527750|gb|MF034900.1| 2065209 g60175 i0 87.313 96.8630952380952 134 17 80 0 33 166 9612 9745 Phytocercomonas venanatans 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 16273 154 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Phytocercomonas Phytocercomonas venanatans
4219202 4219202 PRJNA340009_P_NODE_19884_length_270_cov_16.117647_g19577_i0 PRJNA340009 19884 270 16.117647 43.5176469 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 494 3.4199999999999996e-135   NTclustered gi|238617602|gb|FJ973377.1| 188950 g19577 i0 99.63 33.8296296296296 270 1 100 0 1 270 2407 2138 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 9134 494 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
4219659 4219659 PRJNA340009_P_NODE_60664_length_168_cov_2.226891_g60357_i0 PRJNA340009 60664 168 2.226891 3.74117688 Cercomonas sp. C59 372078 SAR_Eukaryotes SAR_Eukaryotes 135 1.3600000000000002e-27   NTclustered gi|88792584|gb|DQ386165.1| 372078 g60357 i0 81.928 31.7083333333333 166 24 96 5 8 168 2072 2236 Cercomonas sp. C59 28S ribosomal RNA gene, partial sequence blastn 5327 135 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. C59
5496275 5496275 PRJNA340009_P_NODE_9605_length_367_cov_10.685535_g9298_i0 PRJNA340009 9605 367 10.685535 39.21591345 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 551 2.819999999999999e-152   NTclustered gi|238617602|gb|FJ973377.1| 188950 g9298 i0 93.784 94.7656675749319 370 17 100 5 1 367 1713 1347 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 34779 551 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
6769783 6769783 PRJNA340009_P_NODE_40166_length_201_cov_1.322368_g39859_i0 PRJNA340009 40166 201 1.322368 2.65795968 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 279 7.370000000000001e-71   NTclustered gi|238617605|gb|FJ973380.1| 45107 g39859 i0 94.505 87.6218905472637 182 9 90 1 11 191 1425 1606 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 17612 279 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
6769897 6769897 PRJNA340009_P_NODE_4886_length_482_cov_21.387991_g4579_i0 PRJNA340009 4886 482 21.387991 103.09011662 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 747 0   NTclustered gi|33309639|gb|AF411276.1| 188950 g4579 i0 99.513 73.9232365145228 411 1 85 1 72 482 1296 1705 Bodomorpha minima 18S ribosomal RNA gene, complete sequence blastn 35631 747 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
8045322 8045322 PRJNA340009_P_NODE_32507_length_219_cov_91.870588_g32200_i0 PRJNA340009 32507 219 91.870588 201.19658772 Viridiraptor invadens 1435003 SAR_Eukaryotes SAR_Eukaryotes 331 2.22e-86   NTclustered gi|565682836|gb|KF207867.1| 1435003 g32200 i0 99.451 71.7899543378995 182 1 83 0 3 184 497 678 Viridiraptor invadens strain VirI02 18S ribosomal RNA gene, partial sequence blastn 15722 331 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Viridiraptor Viridiraptor invadens
14420900 14420900 PRJNA340009_P_NODE_35072_length_212_cov_26.656442_g34765_i0 PRJNA340009 35072 212 26.656442 56.51165704 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 392 9.67e-105   NTclustered gi|238617602|gb|FJ973377.1| 188950 g34765 i0 100 100.292452830189 212 0 100 0 1 212 825 1036 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 21262 392 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
15695047 15695047 PRJNA340009_P_NODE_6113_length_440_cov_40.299233_g5806_i0 PRJNA340009 6113 440 40.299233 177.3166252 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 802 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g5806 i0 99.545 91.925 440 2 100 0 1 440 1704 2143 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 40447 802 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
18244183 18244183 PRJNA340009_P_NODE_7995_length_396_cov_2.930836_g7688_i0 PRJNA340009 7995 396 2.930836 11.60611056 Protaspis grandis 361427 SAR_Eukaryotes SAR_Eukaryotes 435 3.22e-117   NTclustered gi|290760486|gb|GQ144689.1| 361427 g7688 i0 86.432 98.0277777777778 398 52 100 2 1 396 1675 2072 Protaspis grandis large subunit ribosomal RNA gene, partial sequence blastn 38819 435 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Protaspis Protaspis grandis
18921514 18921514 PRJNA340009_P_NODE_51355_length_181_cov_3.000000_g51048_i0 PRJNA340009 51355 181 3 5.43 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 296 6.43e-76   NTclustered gi|406609775|dbj|AB749050.1| 175275 g51048 i0 100 88.3977900552486 160 0 88 0 22 181 164 323 Uncultured cercozoan gene for 18S ribosomal RNA, partial sequence, clone: Cn-St.1-1 blastn 16000 296 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
19517719 19517719 PRJNA340009_P_NODE_15576_length_300_cov_57.159363_g15269_i0 PRJNA340009 15576 300 57.159363 171.478089 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 366 8.77e-97   NTclustered gi|238617602|gb|FJ973377.1| 188950 g15269 i0 88.742 101.136666666667 302 30 100 4 1 300 2673 2972 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 30341 366 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
19518106 19518106 PRJNA340009_P_NODE_50016_length_183_cov_3.291045_g49709_i0 PRJNA340009 50016 183 3.291045 6.02261235 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 241 3.1e-59   NTclustered gi|33309639|gb|AF411276.1| 188950 g49709 i0 100 71.7540983606557 130 0 71 0 54 183 1831 1702 Bodomorpha minima 18S ribosomal RNA gene, complete sequence blastn 13131 241 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
19518133 19518133 PRJNA340009_P_NODE_52336_length_180_cov_1.396947_g52029_i0 PRJNA340009 52336 180 1.396947 2.5145046 Viridiraptor invadens 1435003 SAR_Eukaryotes SAR_Eukaryotes 305 1.06e-78   NTclustered gi|565682835|gb|KF207866.1| 1435003 g52029 i0 98.83 95.2333333333333 171 2 95 0 1 171 108 278 Viridiraptor invadens strain VirI01 18S ribosomal RNA gene, partial sequence blastn 17142 305 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Viridiraptor Viridiraptor invadens
19518442 19518442 PRJNA340009_P_NODE_8156_length_392_cov_40.626822_g7849_i0 PRJNA340009 8156 392 40.626822 159.25714224 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 329 1.55e-85   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g7849 i0 83.246 56.9515306122449 382 41 97 15 13 392 4021 3661 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 22325 329 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
22068264 22068264 PRJNA340009_P_NODE_10658_length_352_cov_11.013201_g10351_i0 PRJNA340009 10658 352 11.013201 38.76646752 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 470 7.749999999999999e-128   NTclustered gi|224996436|gb|FJ654268.1| 188950 g10351 i0 98.148 42.53125 270 4 77 1 83 352 2 270 Bodomorpha minima 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14971 470 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
22746854 22746854 PRJNA340009_P_NODE_25498_length_243_cov_15.572165_g25191_i0 PRJNA340009 25498 243 15.572165 37.84036095 root 1 Root_unresolved Root_unresolved 363 8.909999999999999e-96   NTclustered gi|238617605|gb|FJ973380.1| 45107 g25191 i0 98.537 85.201646090535 205 3 99 0 38 242 2377 2581 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 20704 363 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
24618197 24618197 PRJNA340009_P_NODE_29580_length_228_cov_3.955307_g29273_i0 PRJNA340009 29580 228 3.955307 9.01809996 Protaspis grandis 361427 SAR_Eukaryotes SAR_Eukaryotes 311 3.0400000000000003e-80   NTclustered gi|290760486|gb|GQ144689.1| 361427 g29273 i0 91.342 65.1798245614035 231 15 100 5 1 228 2578 2806 Protaspis grandis large subunit ribosomal RNA gene, partial sequence blastn 14861 311 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Protaspis Protaspis grandis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;