RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA340009" and tax_phylum = "Candidatus Portnoyibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Portnoyibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA340009 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27137499 27137499 PRJNA340009_P_NODE_6202_length_438_cov_11.110540_g5895_i0 PRJNA340009 6202 438 11.11054 48.6641652 Candidatus Portnoybacteria bacterium RBG_13_4 2053593 Bacteria Bacteria 86.3 2e-16   NR OGZ33496.1 1801990 g5895 i0 47.7 0.589041095890411 86 44 58.2 1 436 182 481 566 OGZ33496.1 MAG: hypothetical protein A3H00_02395 [Candidatus Portnoybacteria bacterium RBG_13_40_8] diamond 258 86.3 1 Bacteria Bacteria candidate phyla   Candidatus Portnoyibacteriota         Candidatus Portnoybacteria bacterium RBG_13_40_8
27232705 27232705 PRJNA340009_P_NODE_35663_length_211_cov_1.950617_g35356_i0 PRJNA340009 35663 211 1.950617 4.11580187 Candidatus Portnoybacteria bacterium 2053593 Bacteria Bacteria 101 1.88e-23   NR MBI3335733.1 2053593 g35356 i0 62.3 0.981042654028436 69 26 98.1 0 5 211 15 83 MBI3335733.1 hypothetical protein [Candidatus Portnoybacteria bacterium] diamond 207 101 1 Bacteria Bacteria candidate phyla   Candidatus Portnoyibacteriota         Candidatus Portnoybacteria bacterium
28969554 28969554 PRJNA340009_P_NODE_67068_length_165_cov_0.879310_g66761_i0 PRJNA340009 67068 165 0.87931 1.4508615 Candidatus Portnoybacteria bacterium RBG_13_4 2053593 Bacteria Bacteria 56.2 1.74e-7   NR OGZ33204.1 1801990 g66761 i0 78.6 0.509090909090909 28 6 50.9 0 1 84 205 232 OGZ33204.1 MAG: hypothetical protein A2V69_01600 [Candidatus Portnoybacteria bacterium RBG_13_40_8] diamond 84 56.2 1 Bacteria Bacteria candidate phyla   Candidatus Portnoyibacteriota         Candidatus Portnoybacteria bacterium RBG_13_40_8

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;