RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA340009" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA340009 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27471294 27471294 PRJNA340009_P_NODE_72103_length_163_cov_0.894737_g71796_i0 PRJNA340009 72103 163 0.894737 1.45842131 Bacteria 2 Bacteria Bacteria 84.7 5.5e-19   NR MBV8194434.1 2052315 g71796 i0 72.2 2.98159509202454 54 15 99.4 0 163 2 51 104 MBV8194434.1 NADH-quinone oxidoreductase subunit NuoE [Candidatus Dormiibacterota bacterium] diamond 486 85.1 0.995299647473561 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
30106218 30106218 PRJNA340009_P_NODE_60872_length_168_cov_1.714286_g60565_i0 PRJNA340009 60872 168 1.714286 2.88000048 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 81.3 3.25e-16   NR HYL70964.1 2052315 g60565 i0 70.6 7.48214285714286 51 15 91.1 0 155 3 199 249 HYL70964.1 ISKra4 family transposase [Candidatus Dormiibacterota bacterium] diamond 1257 81.3 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
32414400 32414400 PRJNA340009_P_NODE_52619_length_179_cov_3.076923_g52312_i0 PRJNA340009 52619 179 3.076923 5.50769217 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 42 0.0299   NR HKF17792.1 2052315 g52312 i0 38.8 0.82122905027933 49 30 82.1 0 22 168 190 238 HKF17792.1 PHB depolymerase family esterase [Candidatus Dormiibacterota bacterium] diamond 147 42 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
32855752 32855752 PRJNA340009_P_NODE_69600_length_164_cov_0.886957_g69293_i0 PRJNA340009 69600 164 0.886957 1.45460948 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 68.6 7.33e-12   NR HEY7199483.1 2052315 g69293 i0 61.5 3.80487804878049 52 20 95.1 0 157 2 1 52 HEY7199483.1 ATP-binding cassette domain-containing protein [Candidatus Dormiibacterota bacterium] diamond 624 68.6 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;