RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA340009" and tax_phylum = "Candidatus Buchananiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Buchananiibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA340009 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27074665 27074665 PRJNA340009_P_NODE_34922_length_213_cov_1.743902_g34615_i0 PRJNA340009 34922 213 1.743902 3.71451126 Candidatus Buchananbacteria bacterium RIFCSPHIGHO2_ 2268182 Bacteria Bacteria 101 2.5299999999999998e-24   NR OGY44463.1 1797532 g34615 i0 70.8 0.915492957746479 65 19 91.5 0 211 17 203 267 OGY44463.1 MAG: hypothetical protein A2729_02255 [Candidatus Buchananbacteria bacterium RIFCSPHIGHO2_01_FULL_39_14] diamond 195 101 1 Bacteria Bacteria candidate phyla   Candidatus Buchananiibacteriota         Candidatus Buchananbacteria bacterium RIFCSPHIGHO2_01_FULL_39_14
28464447 28464447 PRJNA340009_P_NODE_71346_length_163_cov_0.894737_g71039_i0 PRJNA340009 71346 163 0.894737 1.45842131 Candidatus Buchananbacteria bacterium 2268182 Bacteria Bacteria 87.8 1.68e-18   NR MFA6428290.1 2268182 g71039 i0 79.6 0.993865030674847 54 11 99.4 0 2 163 788 841 MFA6428290.1 preprotein translocase subunit SecA [Candidatus Buchananbacteria bacterium] diamond 162 87.8 1 Bacteria Bacteria candidate phyla   Candidatus Buchananiibacteriota         Candidatus Buchananbacteria bacterium
30881757 30881757 PRJNA340009_P_NODE_58234_length_171_cov_5.483607_g57927_i0 PRJNA340009 58234 171 5.483607 9.37696797 Bacteria 2 Bacteria Bacteria 73.9 8.24e-14   NR OGY41233.1 1797530 g57927 i0 74 3.43859649122807 50 13 87.7 0 150 1 237 286 OGY41233.1 MAG: hypothetical protein A2Y82_01835 [Candidatus Buchananbacteria bacterium RBG_13_36_9] diamond 588 74.3 0.994616419919246 Bacteria Bacteria candidate phyla   Candidatus Buchananiibacteriota         Candidatus Buchananbacteria bacterium RBG_13_36_9
31148541 31148541 PRJNA340009_P_NODE_65015_length_166_cov_0.871795_g64708_i0 PRJNA340009 65015 166 0.871795 1.4471797 Candidatus Buchananbacteria bacterium 2268182 Bacteria Bacteria 45.8 0.00103   NR MFA6428101.1 2268182 g64708 i0 40.4 0.849397590361446 47 28 84.9 0 160 20 98 144 MFA6428101.1 hypothetical protein [Candidatus Buchananbacteria bacterium] diamond 141 45.8 1 Bacteria Bacteria candidate phyla   Candidatus Buchananiibacteriota         Candidatus Buchananbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;