RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA340009" and tax_phylum = "Candidatus Altarchaeota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Altarchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA340009 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26916507 26916507 PRJNA340009_P_NODE_46722_length_188_cov_4.366906_g46415_i0 PRJNA340009 46722 188 4.366906 8.20978328 Candidatus Altiarchaeales archaeon 2250256 Archaea Archaea 59.3 2.79e-9   NR MBD3388334.1 2250256 g46415 i0 59.1 2.12234042553191 44 18 70.2 0 175 44 24 67 MBD3388334.1 desulfoferrodoxin [Candidatus Altiarchaeales archaeon] diamond 399 59.3 1 Archaea   Nanobdellati Candidatus Altarchaeota Candidatus Altiarchaeia Candidatus Altarchaeales     Candidatus Altiarchaeales archaeon
29948404 29948404 PRJNA340009_P_NODE_46531_length_189_cov_1.185714_g46224_i0 PRJNA340009 46531 189 1.185714 2.24099946 Candidatus Altiarchaeales archaeon 2250256 Archaea Archaea 84 6.83e-19   NR MBD3388747.1 2250256 g46224 i0 75 0.825396825396825 52 13 82.5 0 12 167 81 132 MBD3388747.1 S-adenosylmethionine decarboxylase [Candidatus Altiarchaeales archaeon] diamond 156 84 1 Archaea   Nanobdellati Candidatus Altarchaeota Candidatus Altiarchaeia Candidatus Altarchaeales     Candidatus Altiarchaeales archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;